Gene Information

Name : Hbor_38310 (Hbor_38310)
Accession : YP_004044501.1
Strain :
Genome accession: NC_014736
Putative virulence/resistance : Virulence
Product : aldehyde dehydrogenase (acceptor)
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG1012
EC number : 1.2.99.3
Position : 26895 - 28418 bp
Length : 1524 bp
Strand : -
Note : PFAM: Aldehyde dehydrogenase family

DNA sequence :
ATGTCAAGCGACAACACCCAACCAACAGCAGAGCGAAAGTCAGCAATCAAGCAGCGACACGCACAGACTGCGGAAGACGT
ACTCCCCGAACACCGGGAACTGTACATCGGGGGAGAGTGGGTAAGGAGTGCCTCGGGTGAGACGTTTGAAACACGCGATC
CCACAACTGGAGAGACACTGGCTACTCTCCAAGCGGGTGTCGAAGCGGACATCGACAATGCCGTCGAAGCGGCTTGGAAA
GGATACAACACGGTCTACAGCGACTACTCGACCGCTGATCGGCAGGCACTGCTCCAAGAGATTGCAGACCGCGTCGAAGC
CAATAAAGAAGCGTTCGCACAGTTGGAATCGCTCGACAACGGGAAGCCGATAACCGAGGCCCGTATCGACATCGAGTTGG
TTGTCGATCACTTCCGGTACTTCGCGGGACTCGCTCGGTCTCACAAAGGGGAAACAATCGAGACAGACGATAGCCGTAGC
GTTCAGACGTACAACGAGCCGTACGGGGTTGTGGGGCAGATCATCCCGTGGAACTTCCCGTTGCTGATGGCCGCGTGGAA
ACTCGCCCCAGCACTGGCCGCCGGGAACGCAGTCGTTCTCAAGCCCGCCGAAGAAACCCCTCTCTCCGTACTCAAACTGA
TGGAGGAGGCGGGAGACGTCATCCCCGACGGCGTCGTCAACGTCGTGACTGGATTCGGAACAGAGGCGGGCGCGCCGCTC
GCCAGTCACGAGGACATCCGGAAGGTTGCTTTCACCGGGTCAACCGAAGTCGGGAGTGAGGTAATGAAGAGCGCAGCAGA
GAATATCACCGACATCACACTCGAACTCGGCGGGAAGAGCCCACTCGTCGTCTTCCCCGATGCGGACCTTGAACAGGCCG
TCCGGACGACGATTACGGCGATCTTTTTCAACACCGGTGAGTGCTGTTGTGCGGGATCTCGGTTGTTCGTCCACGAGGAT
GTCAAAACGGAATTCCTCGACGAACTGGCTGCTGCCGCAGCGGAGTTAGTCGTCGGCGACCCGCTGCTCGAATCGACAGA
CATCGGTCCGAAAGTGTCCGAAGAGCAGGTCAAAAATACGATGAGCTACATTGAGGAAGCCCGCGATTCGGGTGCATCAT
TCCTTACAGGGGGCGCGCAGCCGGACGACGAAGCGCTGGCGGACGGCTGTTTCGTCACACCCACGCTCATCGACGAAATC
GACCATAACAACCGTGCTGTTCAGGAGGAGATCTTTGGCCCGGTACAAGAGGTGTTCACGTGGAGCGACTACGATGAGAT
GATCGAACTGGCGAACGACGTCGATTACGGGCTGGCGGCAGGTATCCTGACTCAGGATCTCACAAAGGCACACCAATGCG
CAAAAGACATCGAAGCCGGAAATATCTGGGTTAACACCTACAACGACTTCCCGGCAGGACAGCCCTTCGGCGGCTACAAG
AAGTCGGGCATCGGACGCGAAACTTCCCAGAAGGCCATCGACCATTACACGCAGACGAAAACAGTCAATTTCTCGCTGCA
GTGA

Protein sequence :
MSSDNTQPTAERKSAIKQRHAQTAEDVLPEHRELYIGGEWVRSASGETFETRDPTTGETLATLQAGVEADIDNAVEAAWK
GYNTVYSDYSTADRQALLQEIADRVEANKEAFAQLESLDNGKPITEARIDIELVVDHFRYFAGLARSHKGETIETDDSRS
VQTYNEPYGVVGQIIPWNFPLLMAAWKLAPALAAGNAVVLKPAEETPLSVLKLMEEAGDVIPDGVVNVVTGFGTEAGAPL
ASHEDIRKVAFTGSTEVGSEVMKSAAENITDITLELGGKSPLVVFPDADLEQAVRTTITAIFFNTGECCCAGSRLFVHED
VKTEFLDELAAAAAELVVGDPLLESTDIGPKVSEEQVKNTMSYIEEARDSGASFLTGGAQPDDEALADGCFVTPTLIDEI
DHNNRAVQEEIFGPVQEVFTWSDYDEMIELANDVDYGLAAGILTQDLTKAHQCAKDIEAGNIWVNTYNDFPAGQPFGGYK
KSGIGRETSQKAIDHYTQTKTVNFSLQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
aldA AAC12273.1 aldehyde dehydrogenase Virulence VPI Protein 7e-83 49
aldA AAK20747.1 aldehyde dehydrogenase Virulence VPI Protein 7e-83 49
aldA AAK20776.1 aldehyde dehydrogenase Virulence VPI Protein 7e-83 49
aldA-1 YP_001216300.1 aldehyde dehydrogenase Not tested VPI-1 Protein 3e-82 49
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 1e-78 48

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Hbor_38310 YP_004044501.1 aldehyde dehydrogenase (acceptor) VFG0082 Protein 5e-79 48