Gene Information

Name : Palpr_0955 (Palpr_0955)
Accession : YP_004042090.1
Strain : Paludibacter propionicigenes WB4
Genome accession: NC_014734
Putative virulence/resistance : Virulence
Product : sugar transferase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG2148
EC number : -
Position : 1149877 - 1150485 bp
Length : 609 bp
Strand : -
Note : COGs: COG2148 Sugar transferase involved in lipopolysaccharide synthesis; InterPro IPR003362; KEGG: btk:BT9727_4955 sugar transferase; phosphO-glucosyltransferase; PFAM: sugar transferase; SPTR: Sugar transferase; probable phosphO-glucosyltransferase; PFA

DNA sequence : 
ATGTATAGATTTTTTATTAAACCCATTCTAGATTTTATTTTAGCTCTTATAGGATTAATTTTACTATCTCCTGTTTTTTT
TGCTCTAGCTATTTTGATAAAGTTTGATTCTAATGGTCCAGTTTTCTTTAGACAAGAAAGGTTAGGTAAAGGGGGGCGAA
CTTTTCGAATATTTAAATTTCGCTCTATGGTAGATCATGCCATTGAAAAAGGTACAGGTTTAGAGACTTTTAATGGAGAT
CCAAGAATTACTAAAATAGGATCATTTCTTCGAAAGACAAGTTTGGACGAAATTCCTCAATTAATTAATATTTTATTAGG
TGATATGAGTTTTATTGGACCTCGACCTCCTGTAATCAATTTTCCGTATAAAATTGAAGATTATAATGAATTTGATAGAC
GGAGATTCCTTGTTAAACCAGGTATTAGCGGATTGGCTGCAATACGGTGTAGAGAAATACATGATTGGAGCATTAATATA
CCTATAGATGTAGAGTATGTTAGTAAACAAAGTTTCATTTTAGATGCTAAATTGTTTATCAAATCGTTACTTGTTTTTGT
TAAAACCGATAATATTTATTCAAACGATAAACCTCAACGTAAATGCTAG

Protein sequence : 
MYRFFIKPILDFILALIGLILLSPVFFALAILIKFDSNGPVFFRQERLGKGGRTFRIFKFRSMVDHAIEKGTGLETFNGD
PRITKIGSFLRKTSLDEIPQLINILLGDMSFIGPRPPVINFPYKIEDYNEFDRRRFLVKPGISGLAAIRCREIHDWSINI
PIDVEYVSKQSFILDAKLFIKSLLVFVKTDNIYSNDKPQRKC

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cap1N AAL26667.1 type 8 capsule synthesis gene Virulence SCCcap1 Protein 1e-23 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Palpr_0955 YP_004042090.1 sugar transferase VFG1369 Protein 1e-21 43