Gene Information

Name : Palpr_0915 (Palpr_0915)
Accession : YP_004042050.1
Strain : Paludibacter propionicigenes WB4
Genome accession: NC_014734
Putative virulence/resistance : Virulence
Product : thiol peroxidase (atypical 2-cys peroxiredoxin)
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG2077
EC number : 1.11.1.5
Position : 1104128 - 1104619 bp
Length : 492 bp
Strand : +
Note : COGs: COG2077 Peroxiredoxin; InterPro IPR017936: IPR013740: IPR018219; KEGG: pgn:PGN_0388 thiol peroxidase; PFAM: Redoxin domain protein; SPTR: Thiol peroxidase; PFAM: Redoxin

DNA sequence : 
ATGGCAACAGTAAAATTTAAAGGCGGCGATGTACAAACCAACGGTCAATTACCTGCAGTTGGAAGTCAAGCACCGGAATT
CACATTGGTAGGCAGTGGTTTACAGGAAATTCATTTGAGCGACTACAAAGGAAAAAGAGTTGTTCTCAATATTTTCCCGA
GCCTCGACACAGGTACCTGCGCTGCTTCAGTTCGTAAGTTTAACAAGTGGGTTTCTGAGAAAGAAAATGTAGTGGTGATT
TGTGTATCTAAAGATTTACCTTTTGCTCAAAGTCGTTTCTGTGGTGCCGAAGGATTGGAAAATGTAATTACAGCTTCTGA
TTTTAGATACAATACTTTTGCAACCGACTATGGTGTTTTGCTGACAGATGGTCCGCTTAAAGGTTTGATATCACGTTCTG
TTGTGGCTATAGATGAAAACGGAAAGGTAATATATACTGAGCTTGTTCCGGAAATTGTAGATGAACCAAATTACGATATT
ACCGCTTTTTGA

Protein sequence : 
MATVKFKGGDVQTNGQLPAVGSQAPEFTLVGSGLQEIHLSDYKGKRVVLNIFPSLDTGTCAASVRKFNKWVSEKENVVVI
CVSKDLPFAQSRFCGAEGLENVITASDFRYNTFATDYGVLLTDGPLKGLISRSVVAIDENGKVIYTELVPEIVDEPNYDI
TAF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tagD AAK20781.1 toxR-activated gene D protein Virulence VPI Protein 1e-33 44
tagD AAK20751.1 toxR-activated gene D protein Virulence VPI Protein 7e-34 44
tpx NP_230472.1 thiol peroxidase Virulence VPI-1 Protein 1e-33 44
tpx YP_001216305.1 thiol peroxidase Not tested VPI-1 Protein 1e-33 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Palpr_0915 YP_004042050.1 thiol peroxidase (atypical 2-cys peroxiredoxin) VFG0087 Protein 4e-34 44