|
Name : Palpr_0852 (Palpr_0852) Accession : YP_004041989.1 Strain : Paludibacter propionicigenes WB4 Genome accession: NC_014734 Putative virulence/resistance : Virulence Product : ATPase AAA Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 1030451 - 1032961 bp Length : 2511 bp Strand : - Note : COGs: COG0542 ATPase with chaperone activity ATP-binding subunit; InterProIPR018368: IPR001270: IPR004176: IPR003959: IPR 001943: IPR013093: IPR019489: IPR003593; KEGG: pdi:BDI_1089 negative regulator of genetic competence; PFAM: ATPase AAA; Clp domain pr DNA sequence : ATGTCAGTAAATTATTCAGAACAATTGCACAATGTGCTGTTATATAGCTCCCAAGAGGCCGAGCGTCTAGGAAATAATTA CGTAGGGCCGGAGCATCTGCTTTTGGGAATCCTTCGAAACGGAAGCGGAAAGGCTATTGATATTTTAAATGTTTCACACA TCAATATACTGAAGGTGAAACAAATTATCGAAAGTCAGATTCGCACAGACCTGGAACCTACGGGTGCAGAAATTCCAAAC TTGAAAAGTACGGAGCGTATAAAAAAAATTATGGAGTTGGAAACCAAATCTTTATCGGCCGAAACTGCCGATACGGAACA TCTTCTGCTAGCCATATTGAAAGAAAAAAATAATTTGGCAGGTGATATTTTACTTGCCGAACACCTTACCTACGAACAGG CGAAAGCCTTTATCGAAGCACCTAAAGATGTACCTATGATGGGCTCAAGCTTTCAGGATGAAGACGATGATGATGAAGAT CCACGCCAAAAAAAGAGAGCAAATCCCTCGGCAGGTGCGAAGCAAAGTGACACACCTGCTTTGGATACATTTGGAACAGA TATAACCAAAGCGGCTTTGGAAAACCGACTTGATCCTATTGTTGGGCGTACTAATGAAATAGAACGTTTGGCACAGATTT TAAGTCGTAGGAAGAAAAATAATCCGGTGCTTATCGGTGACCCGGGAGTAGGTAAATCGGCTATTGTAGAAGGTTTGGCG TTGCGTATCATTCAACGTCGTGTTTCACGTGTTTTGTTCGACAAGCGAGTTGTTTCGCTGGATATGGCATCTATTGTTGC CGGAACTAAATATCGCGGACAGTTTGAGGAACGCATCAAAGCCATTTTGAATGAATTATCAAAGAATCCGGATGTGATTT TGTTTATTGACGAGATTCATACGATTGTTGGAGCCGGTGGAGCTCCGGGTTCGTTGGATGCTGCCAATATGCTGAAACCT GCATTGGCTCGTGGCGAAATACAGTGTGTTGGAGCTACCACGCTCGATGAATATCGCCAAAGTATTGAAAAAGATGGAGC TTTGGAACGTCGTTTCCAGAAAGTAATGGTCGACCCAACTACGGCTGACGAAACTTTGCAAATTCTGGAAAATATTCAGG ATCGTTATGAATATCATCACAATGTTCGTTATACCCCGGATGCCATTAAAGCTTGTGTGCGGTTAACGGACAGATATATT ACCGATCGTTGTTTTCCTGATAAAGCTATTGATGCTTTGGATGAAGCAGGTTCGCGTGTTCATATCGGAACTGTTTCTGT GCCTGCAGAAATTGAGGAGTTGGAAAAGAAAATAGAAGAATTAAAGAAAGATAAACTGAAAGTACTTTCAGAACAAAAAT ATGAACTGGCCGGCCCAATCCGCGATCAGGAAAAACAATTGCAATATCAACTTGAAGATGCTGTAAAACGATGGGAAGAG GATGCTCAGAAACATCCGGAGACTGTTGATGAGGAACAAGTTGCCGAGGTAGTTGCCATGATGTCGGGGATACCGGTACA ACGAATAGCACAGGCTGAAGGACTTAAACTTCGTCAAATGAAAGATGCTTTGCAAGGCAAGGTTATTGGTCAGGACGAAG CGGTCAATAAGATTGTAAAAGCTATTCAGCGTAACCGGATTGGGTTGAAGGACCCAAGCAAACCGATTGGTTCATTTATT TTTATTGGCCCTACAGGTGTTGGTAAAACACACCTTGCTAAAATATTGGCTGAATTTATGTTCGACAGTTCCGATGCGTT GATTCGTGTAGATATGAGCGAATATATGGAAAAATTCAGTGTTTCGCGCTTGATTGGAGCGCCTCCGGGATATGTTGGAT ACGAAGAAGGCGGACAATTGACTGAAAAAGTACGACGTAAACCTTATTCAATCATTCTGCTAGATGAAATTGAAAAAGCG CATCCCGATGTGTTCAACCTGTTGCTTCAAGTAATGGACGAAGGTCGGTTGACAGACAGTTTAGGTCGTCGTATTGACTT CAAAAACACTATTATCATTATGACTTCAAACGTGGGAACACGTCAGCTGAAGGACTTTGGTAAAGGAGTCGGGTTTAATA CGCCTGCCGAAACGGCGATGGATGCGGAATTTTCGCGTGGTGTTATTCAAAAAGCCTTGAATAGAGCATTTGCACCTGAA TTTCTAAACCGCGTGGACGATGTGATTATGTTTGACCAGTTAAGTAAAGACTCTATCAAATCTATTATTGATCTGGAACT GAAAGGTATTTTTGGACGTGTAACAGCTTTAGGATACAAGTTGGAGCTTACCCCCGAAACAAAAGATTATATTGCCGACA AAGGTTACGATGTTCAGTTTGGTGCCCGTCCGTTGAAACGTGCTATACAGAAATACCTTGAAGATGAACTGGCAGACGTA GTGTTGTCCGGTGAGTTAGAACCAGGTGATACTATTTTGATGGAGTTGGAACCGGAAACAAAAGTAATTAAAGCACGGAT TGTGAAACCTACGATTGCCTTAATGGAATAA Protein sequence : MSVNYSEQLHNVLLYSSQEAERLGNNYVGPEHLLLGILRNGSGKAIDILNVSHINILKVKQIIESQIRTDLEPTGAEIPN LKSTERIKKIMELETKSLSAETADTEHLLLAILKEKNNLAGDILLAEHLTYEQAKAFIEAPKDVPMMGSSFQDEDDDDED PRQKKRANPSAGAKQSDTPALDTFGTDITKAALENRLDPIVGRTNEIERLAQILSRRKKNNPVLIGDPGVGKSAIVEGLA LRIIQRRVSRVLFDKRVVSLDMASIVAGTKYRGQFEERIKAILNELSKNPDVILFIDEIHTIVGAGGAPGSLDAANMLKP ALARGEIQCVGATTLDEYRQSIEKDGALERRFQKVMVDPTTADETLQILENIQDRYEYHHNVRYTPDAIKACVRLTDRYI TDRCFPDKAIDALDEAGSRVHIGTVSVPAEIEELEKKIEELKKDKLKVLSEQKYELAGPIRDQEKQLQYQLEDAVKRWEE DAQKHPETVDEEQVAEVVAMMSGIPVQRIAQAEGLKLRQMKDALQGKVIGQDEAVNKIVKAIQRNRIGLKDPSKPIGSFI FIGPTGVGKTHLAKILAEFMFDSSDALIRVDMSEYMEKFSVSRLIGAPPGYVGYEEGGQLTEKVRRKPYSIILLDEIEKA HPDVFNLLLQVMDEGRLTDSLGRRIDFKNTIIIMTSNVGTRQLKDFGKGVGFNTPAETAMDAEFSRGVIQKALNRAFAPE FLNRVDDVIMFDQLSKDSIKSIIDLELKGIFGRVTALGYKLELTPETKDYIADKGYDVQFGARPLKRAIQKYLEDELADV VLSGELEPGDTILMELEPETKVIKARIVKPTIALME |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 2e-173 | 45 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Palpr_0852 | YP_004041989.1 | ATPase AAA | VFG0080 | Protein | 5e-146 | 49 |
| Palpr_0852 | YP_004041989.1 | ATPase AAA | VFG0079 | Protein | 0.0 | 48 |
