Gene Information

Name : Palpr_0314 (Palpr_0314)
Accession : YP_004041461.1
Strain : Paludibacter propionicigenes WB4
Genome accession: NC_014734
Putative virulence/resistance : Resistance
Product : transferase hexapeptide repeat containing protein
Function : -
COG functional category : R : General function prediction only
COG ID : COG0110
EC number : 2.3.1.28
Position : 376141 - 376773 bp
Length : 633 bp
Strand : +
Note : COGs: COG0110 Acetyltransferase (isoleucine patch superfamily); InterPro IPR001451: IPR018357; KEGG: cyh:Cyan8802_2073 VatB; PFAM: transferase hexapeptide repeat containing protein; SPTR: Virginiamycin A acetyltransferase

DNA sequence : 
ATGACTGGACCAGACAAAGAAAAAGACTTTCCACTTGAGAACTATGACAGACTTTGCTTTCTGAAAAATATCGTCAAAAA
TCCAAACATAATTGTTGGTGAATATACCTATTATGACGATTTTGAAAATGTTGAGAACTTTGAGAAAAATGTAAAATATC
ATTTTGACTTTATTGGCGACAAACTAATTATTGGCAAGTTTTGTATGATAGCTTCTGACGTGAAATTTATTATGAATGGA
GCAAATCATTTGACAAACTCATTGACAACATATCCTTTTGCGATTTTCGGAAACGGCTGGGAAAATGCAATGGACGGAAA
GCAATATCCTCAAAAAGGTGACATAATCATAGGTAACGATGTTTGGATTGGTTATAACGCAACAATTATGGCAGGCGTGA
CAATTGGGGACGGAGCAATTATTGCGACAAATTCAACTGTGATCAAAGATGTTGAACCATATTCAATCGTTGGCGGAAAT
CCTGCAATTGAGATTAAAAAAAGATTTTCAACAGAAGTAATTGAAAGGTTACGTAAACTAAAATGGTGGGAATGGGACAT
AGAGAAAATAACAAAGAACATTCAAAATCTGACTGACTCCAACATTGACAAATTAGAAACAACAAATATATAG

Protein sequence : 
MTGPDKEKDFPLENYDRLCFLKNIVKNPNIIVGEYTYYDDFENVENFEKNVKYHFDFIGDKLIIGKFCMIASDVKFIMNG
ANHLTNSLTTYPFAIFGNGWENAMDGKQYPQKGDIIIGNDVWIGYNATIMAGVTIGDGAIIATNSTVIKDVEPYSIVGGN
PAIEIKKRFSTEVIERLRKLKWWEWDIEKITKNIQNLTDSNIDKLETTNI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
catB8 YP_005797132.1 chloramphenicol acetyltransferase Not tested AbaR4e Protein 6e-29 45
catB3 AET25385.1 chloramphenicol acetyltransferase Not tested PAGI-2(C) Protein 2e-28 44
catB3 AFG30108.1 chloramphenicol acetyltransferase Not tested PAGI-2 Protein 2e-28 44

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Palpr_0314 YP_004041461.1 transferase hexapeptide repeat containing protein AM180355.1.gene2499. Protein 8e-46 50
Palpr_0314 YP_004041461.1 transferase hexapeptide repeat containing protein CP001581.1.gene990.p Protein 8e-35 46
Palpr_0314 YP_004041461.1 transferase hexapeptide repeat containing protein AY123251.gene2.p01 Protein 2e-29 45
Palpr_0314 YP_004041461.1 transferase hexapeptide repeat containing protein AF322577.2.gene4.p01 Protein 8e-29 44
Palpr_0314 YP_004041461.1 transferase hexapeptide repeat containing protein AY740681.1.gene5.p01 Protein 8e-29 44
Palpr_0314 YP_004041461.1 transferase hexapeptide repeat containing protein JF268688.1.gene6.p01 Protein 8e-29 44
Palpr_0314 YP_004041461.1 transferase hexapeptide repeat containing protein NC_010410.6000796.p0 Protein 3e-20 41
Palpr_0314 YP_004041461.1 transferase hexapeptide repeat containing protein NC_011595.7057349.p0 Protein 3e-20 41
Palpr_0314 YP_004041461.1 transferase hexapeptide repeat containing protein NC_002516.2.878374.p Protein 1e-27 41
Palpr_0314 YP_004041461.1 transferase hexapeptide repeat containing protein NC_011586.7045146.p0 Protein 2e-20 41