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Name : Palpr_3047 (Palpr_3047) Accession : YP_004044160.1 Strain : Paludibacter propionicigenes WB4 Genome accession: NC_014734 Putative virulence/resistance : Virulence Product : lysyl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG1190 EC number : - Position : 3673737 - 3675464 bp Length : 1728 bp Strand : - Note : COGs: COG1190 LysyL-tRNA synthetase (class II); InterProIPR002313: IPR004365: IPR004364: IPR018149: IPR 006195; KEGG: bfs:BF3602 lysyL-tRNA synthetase; PFAM: tRNA synthetase class II (D K and N); nucleic acid binding OB-fold tRNA/helicase-type; SPTR: Lysy DNA sequence : ATGAGCACAGAACTTAGCGAACAAGAACAGTTTAGACGTCAAAGTCTGGACGAATTACGAAATTTGGGCATCGATCCTTA TCCTGCCGCACTGTATCCAACCGACGCATTTTCCACCGATATAAAAGCTGAATTTAAAGACGACGAAAGCGGTAAACCCG TTTGCGTGGCAGGTCGTATAATGAGCCGCCGCATCATGGGCAAAGCTTCATTCGTAGAACTGCAAGACTCCAAAGGTCGT ATTCAGGTTTACGTAAGTCGCGACGACATCAACACCGAAGCGCAACCCGAAATGTACAACGTCGTATTCAAAAAGCTATT GGATATCGGCGATTTTGTGGGGATCAAAGGTTTTGTATTCCGCACCCAAATGGGCGAAATCAGTGTTCATGCGCAAGAAC TCACCGTACTGAGCAAGGCGCTGCGCCCGCTCCCTATCGTAAAATATAAAGATGGCGTGGCTTTCGATGCTTTCGAAGAC CCTGAACAACGCTACCGTCAGCGCTACGTGGACCTGGTGGTAAACGATGGCGTAAAAGATATTTTTCTGAAACGTACCAA GGTGTACCAATCTATGCGCGACTACTTCAACGCTCAGGGTTACATCGAGGTAGAAACTCCTATTCTGCAATCGATACCCG GTGGTGCTTCGGCTCGTCCGTTTATTACCCATCACAACGCGCTGGACATCCCGCTGTACCTCCGTGTGGCCGATGAGTTA TACCTCAAAAGACTGATTGTAGGCGGATTTGAAGGCGTTTATGAATTCTCCAAAAACTTCCGCAACGAAGGTATGGACCG TACCCACAATCCTGAATTTACAGCCATGGAAATATACGTAGCCTACAAAGACTACAACTGGATGATGGACTTCACCGAAC GAATGATAGAGAAAATTTGTTTAGATGTGAACGGCACTAACGAAATTACCGTGGGCGATAAAACCATCAGTTTCAAAACG CCGTTTAAGCGCATTACTATGATTGATGCTATTAAAGAACACACCGGCATAGACATCAACGGCATGGACGAAGTTCAGCT GCGCGAAGTGTGCAAAACGTTGCACGTGGAAGTTGATGAAACCATGGGTAAAGGCAAAATGATTGACGAAATCTTCGGCG AAAAATGCGAAGGAAACTACATACAACCAACTTTTATTACCGATTATCCGCGCGAAATGTCGCCTCTGTGTAAACGCCAC CGCGACAACCCCGAGCTGACAGAACGTTTCGAGTTGATGGTAAACGGTAAAGAGCTGGCGAATGCTTACTCGGAACTGAA CGACCCAATCGACCAACTTGGACGCTTTCAGGAACAACTGAAACTGAGCGAAAAGGGCGATGACGAAGCTATGTTTATCG ATATGGATTTTGTGCGCTCATTGGAATACGGTATGCCTCCTACTTCAGGAATGGGTATCGGTATGGATCGTTTGGTAATG CTTATGACCGGTCAGCAAGCCATACAGGAAGTGCTTTTCTTCCCTCAAATGAAGCCCGAAAAGGTAGCCAAAAAAGATGG TCCCGATAAATTCATAGCATTGGGCATCCCCGAAGCATGGGTTGAGGTGGTTCAAAAAGCCGGCATCGTAATGGTTGCCG ACCTCAAAGGACTAAACCCGAACAAATTCCATCAGGACATTTGCGGAATCAATAAAAAGAACAAACTGGAATTGACCAAC CCGTCGAAAGAAGACGTGGCAGAATGGATTGAAGCAGTAAACAAGTAA Protein sequence : MSTELSEQEQFRRQSLDELRNLGIDPYPAALYPTDAFSTDIKAEFKDDESGKPVCVAGRIMSRRIMGKASFVELQDSKGR IQVYVSRDDINTEAQPEMYNVVFKKLLDIGDFVGIKGFVFRTQMGEISVHAQELTVLSKALRPLPIVKYKDGVAFDAFED PEQRYRQRYVDLVVNDGVKDIFLKRTKVYQSMRDYFNAQGYIEVETPILQSIPGGASARPFITHHNALDIPLYLRVADEL YLKRLIVGGFEGVYEFSKNFRNEGMDRTHNPEFTAMEIYVAYKDYNWMMDFTERMIEKICLDVNGTNEITVGDKTISFKT PFKRITMIDAIKEHTGIDINGMDEVQLREVCKTLHVEVDETMGKGKMIDEIFGEKCEGNYIQPTFITDYPREMSPLCKRH RDNPELTERFELMVNGKELANAYSELNDPIDQLGRFQEQLKLSEKGDDEAMFIDMDFVRSLEYGMPPTSGMGIGMDRLVM LMTGQQAIQEVLFFPQMKPEKVAKKDGPDKFIALGIPEAWVEVVQKAGIVMVADLKGLNPNKFHQDICGINKKNKLELTN PSKEDVAEWIEAVNK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD66193.1 | putative lysil-tRNA synthetase LysU | Not tested | PAI III 536 | Protein | 1e-102 | 46 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Palpr_3047 | YP_004044160.1 | lysyl-tRNA synthetase | VFG1668 | Protein | 8e-103 | 46 |
