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Name : Palpr_3020 (Palpr_3020) Accession : YP_004044133.1 Strain : Paludibacter propionicigenes WB4 Genome accession: NC_014734 Putative virulence/resistance : Virulence Product : 3-deoxy-d-mannO- octulosonatecytidylyltransferase Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG1212 EC number : 2.7.7.38 Position : 3640384 - 3641166 bp Length : 783 bp Strand : - Note : COGs: COG1212 CMP-2-ketO-3-deoxyoctulosonic acid synthetase; InterPro IPR004528: IPR003329; KEGG: pdi:BDI_0522 3-deoxy-mannO-octulosonate cytidylyltransferase; PFAM: acylneuraminate cytidylyltransferase; PRIAM: 3-deoxy-mannO-octulosonate cytidylyltransfer DNA sequence : ATGTCACCAACTTCATTAAAAGAACCTGCTTCATTACGATTTGTAGGAATTATCCCTGCCCGCTTTGCTTCAACCCGTTT TCCGGGGAAACCATTAGTGGACATCGGAGGAAAAACGATGATACAACGCGTGTATGAACAGGTATCAAAAGCATTGGAAA ATGTATATGTAGCTACAGACGACAACCGTATTTTCGAAGCTGTGATTAGTTTCGGGGGCAAGGCAATAATGACTTCCGAC AAACACAAAAGCGGAACCGACCGGTGTTTTGAAGCATTTACAAAATTGGATGAATGGTTTGATGTGGTGGTCAATATTCA GGGCGATGAACCTTTCATACAACCGGAACAGATCATTGAACTGCAGAACTGCTTTGCTGATACCAATACTCAGATTGCCA CGTTGGCTAAAAAAGTAACTGCAAAGGACAGCATAGAATTTATCACTAACCCCAATAACCCAAAACTGGTTATAAATAAA CTCAATGAGGCAATGTACTTCAGCCGTTCTGTAATTCCATACAGACGCGGGGCAGAGCTGGAAGACTGGATTTCACTTCA CCCCTACCTTAAGCACGTGGGTATTTATGCTTACCGGGCCGATGTGCTTCGGGAACTCACGCTATTGGAACAATCGCCAC TTGAAATTGCCGAATCGTTGGAACAGCTCCGATGGCTTGAAAACGGCTATCGCATTAAAGTTGGCTTTACCGACGTAGAA ACTGTGGGTATTGACACTCCCGAAGATTTGGAAAAAGTGAAAGATTTACTGAAAGATAGTTAA Protein sequence : MSPTSLKEPASLRFVGIIPARFASTRFPGKPLVDIGGKTMIQRVYEQVSKALENVYVATDDNRIFEAVISFGGKAIMTSD KHKSGTDRCFEAFTKLDEWFDVVVNIQGDEPFIQPEQIIELQNCFADTNTQIATLAKKVTAKDSIEFITNPNNPKLVINK LNEAMYFSRSVIPYRRGAELEDWISLHPYLKHVGIYAYRADVLRELTLLEQSPLEIAESLEQLRWLENGYRIKVGFTDVE TVGIDTPEDLEKVKDLLKDS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| kpsU | CAE85213.1 | KpsU protein | Virulence | PAI V 536 | Protein | 1e-41 | 47 |
| kpsU | YP_854332.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | Not tested | PAI I APEC-O1 | Protein | 3e-41 | 46 |
| kpsU | AAZ04469.1 | CMP-KDO synthetase | Virulence | PAI I APEC-O1 | Protein | 2e-41 | 46 |
