Gene Information

Name : Palpr_2919 (Palpr_2919)
Accession : YP_004044033.1
Strain : Paludibacter propionicigenes WB4
Genome accession: NC_014734
Putative virulence/resistance : Unknown
Product : single-strand binding protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0629
EC number : -
Position : 3492380 - 3492802 bp
Length : 423 bp
Strand : -
Note : COGs: COG0629 Single-stranded DNA-binding protein; InterPro IPR000424: IPR011344; KEGG: bfs:BF1571 single-strand binding protein; PFAM: single-strand binding protein/Primosomal replication protein n; SPTR: Single-stranded DNA-binding protein; TIGRFAM: sin

DNA sequence : 
ATGTCTGTTAACAAAGTAATTTTGGTAGGGAATGTAGGAAAAGATCCTGAAGTTCGCTACCTGGAGAAAAATCTGGCTGT
TGCAAATTTCACCTTAGCAACTACAGAAAGAGGCTACACAACTCAAAGTGGAATACAAGTGCCTGAACGCACAGAATGGC
ACAACATTGTTGCCTGGAGAGGGTTGGCCGAACTGTCTGAAAAGTACATCCGAAAAGGAAGCCAATTGTACATTGAAGGA
AAAATACAAACCCGTTCGTGGGAAAAAGACGGTATTAAACGCTATACAACGGAGATTTTTGCTGATACTATCCAACTGTT
AGGCAAGAAGCCTGAGAGTACTGAACCATTAAGTACTGTTGCAGCCCCTCCGGCTGATGCTATACAAGCACCTCCTCATG
CCGAGGATGATCTTCCTTTTTAA

Protein sequence : 
MSVNKVILVGNVGKDPEVRYLEKNLAVANFTLATTERGYTTQSGIQVPERTEWHNIVAWRGLAELSEKYIRKGSQLYIEG
KIQTRSWEKDGIKRYTTEIFADTIQLLGKKPESTEPLSTVAAPPADAIQAPPHAEDDLPF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ssb1 YP_005176252.1 single-stranded DNA-binding protein Not tested ICEPmu1 Protein 2e-17 46
SH1792 YP_253707.1 single strand DNA binding protein Not tested ¥ÕSh1 Protein 5e-13 41
SAUSA300_1958 YP_494609.1 single-strand binding protein Not tested ¥ÕSa3 Protein 1e-12 41
SAUSA300_1958 YP_494609.1 single-strand binding protein Not tested ¥ÕSa3 Protein 1e-12 41
SAKOR_01963 YP_008492151.1 Single-strand DNA binding protein Not tested ¥ÕSa3 Protein 7e-13 41
MW1921 NP_646738.1 single-strand DNA-binding protein Not tested ¥ÕSa3 Protein 3e-12 41
SAV1983 NP_372507.1 single-strand DNA-binding protein Not tested ¥ÕSa3 Protein 1e-12 41
SA1792 NP_375091.1 single-strand DNA-binding protein Not tested ¥ÕSa3 Protein 1e-12 41