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Name : Palpr_2668 (Palpr_2668) Accession : YP_004043783.1 Strain : Paludibacter propionicigenes WB4 Genome accession: NC_014734 Putative virulence/resistance : Virulence Product : winged helix family two component transcriptional regulator Function : - COG functional category : T : Signal transduction mechanisms COG ID : COG0745 EC number : - Position : 3208376 - 3209059 bp Length : 684 bp Strand : - Note : COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR001789: IPR001867; KEGG: zpr:ZPR_1366 two component transcriptional regulator, winged helix family; PFAM: response regulator rec DNA sequence : ATGGACTCAAAGCTAACTATTCTGATAATAGATGACGAAATCCAGATAAGGAGACTTCTCGAAATAAATCTTTCTGCCAA CGGTTATCGGGCTGTTGAAGCCGAAACGGGGAAAGACGGCTGTTTGTTAGCGGCTTCTGTAAATCCGGCTCTGATTATTC TGGATTTGGGATTACCCGATATGGATGGATTGGAAGTGTTGAAAAAACTGCGCGATTGGTACACAGGTCCCATCATTATT CTTTCTGCCCGCAATTCCGAAGAGGACATTGTATGGGCATTGGACAACGGGGCTAACGACTATCTGACCAAACCATTTCG TACCCGTGAGTTGCTGGCAAGGATACGTGTGGCTACACATCAAGTTATTCGTCAACAGGATGCAGCCATGGTATTTGATA ACCTGACCATTGATCTTAGTAAACACGTGGCCACTAAAAATGGTGAAATCATTAAACTAACTACCACAGAGTTTTCGTTG TTGGCATTGATGGCCAAAAATGAAGGAAGAGTGCTCACTCACGTGTATATTCTCCAGGAAATCTGGGGTTATGGCTATAC CGAACAAACCCAATACCTACGGGTTTTTGTTGCACAATTACGTAAAAAAATAGAAGACGATCCCACTAAGCCTAAATTAC TGATTACCGAATCGGGCATTGGATACAGGTTTAGTGGAATATAA Protein sequence : MDSKLTILIIDDEIQIRRLLEINLSANGYRAVEAETGKDGCLLAASVNPALIILDLGLPDMDGLEVLKKLRDWYTGPIII LSARNSEEDIVWALDNGANDYLTKPFRTRELLARIRVATHQVIRQQDAAMVFDNLTIDLSKHVATKNGEIIKLTTTEFSL LALMAKNEGRVLTHVYILQEIWGYGYTEQTQYLRVFVAQLRKKIEDDPTKPKLLITESGIGYRFSGI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| EF0571 | NP_814337.1 | DNA-binding response regulator | Not tested | Not named | Protein | 3e-38 | 44 |
| ef0091 | AAM75294.1 | EF0091 | Not tested | Not named | Protein | 2e-38 | 44 |
| kdpE | BAA82188.1 | KDP operon transcriptional regulatory protein KdpE | Not tested | Type-II SCCmec | Protein | 8e-34 | 42 |
| kdpE | YP_039536.1 | response regulator protein | Not tested | Type-II SCCmec | Protein | 1e-33 | 42 |
| kdpE | NP_370594.1 | transcriptional regulator kdpE | Not tested | Type-II SCCmec | Protein | 1e-33 | 42 |
| kdpE | NP_373306.1 | hypothetical protein | Not tested | Type-II SCCmec | Protein | 1e-33 | 42 |
| kdeP | YP_190033.1 | DNA-binding response regulator KdeP | Not tested | Type-II SCCmec | Protein | 1e-33 | 42 |
| SH0031 | YP_251946.1 | hypothetical protein | Not tested | SCCmec | Protein | 2e-34 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Palpr_2668 | YP_004043783.1 | winged helix family two component transcriptional regulator | VFG1390 | Protein | 2e-31 | 41 |
