Gene Information

Name : Palpr_2584 (Palpr_2584)
Accession : YP_004043701.1
Strain : Paludibacter propionicigenes WB4
Genome accession: NC_014734
Putative virulence/resistance : Unknown
Product : porphobilinogen deaminase
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0181
EC number : 2.5.1.61
Position : 3112291 - 3113211 bp
Length : 921 bp
Strand : -
Note : COGs: COG0181 Porphobilinogen deaminase; InterPro IPR000860; KEGG: bbe:BBR47_18030 porphobilinogen deaminase; PFAM: Porphobilinogen deaminase; SPTR: Porphobilinogen deaminase; TIGRFAM: porphobilinogen deaminase; PFAM: Porphobilinogen deaminase, C-terminal

DNA sequence : 
ATGAGTAAGAAATTCGTTGTAGCCACACGCCCCAGCCTGTTGGCTTACACGCAAACACAGCAAACCGTAGATTTGCTTCG
GGTCAAAAATCCGGATTGTGAATTCGAAATAGTAAAAATATCCACTCACGGTGACACAGTGACCGACAAACCACTGACTG
CTTTTGGCGGTACAGGAGTGTTCGTAAAAGAACTGGAAAATGCGCTCTACGAAGGTAAAGCGCATTTTGCCATTCATAGT
TTGAAGGATGTTCCGAGCATTCAGCCGGAAGGTTTGGTGCTGGCAGCATTCCCTACAAGGCAGGATCCACGCGATTTGTT
GCTCACCCGTGGTGGTGTCAGCGTGGCTGATTTGCCCTCGCCCTGCGTGATTGGAACGGGCAGTCCGCGACGCATGGTTC
AGGTAGCTAAACTGAAAGAACAAATCACTTTTGCCGATTTGCGGGGAAATATCGACACCCGACTGAAAAAACTAGAAGAC
GGTCAGTACGATGCTATTGTGTTGGCGGCAGCCGGCCTGAAACGTTTGGGAAAAGAAATTGCAGAATCGGCTTATATGCC
AACCGATGTGTGCTTACCGGCCATTGGACAAGGAGCTATCGCCATCGAATGCCGTGCTGATGATGCAGAAACCATCGCCA
TGCTAAAATCGATCAACGATGCAGCTACCGAAACGGCCATTGTTGCCGAACGTAGCTATATGAAAACTATCGGTGGCGGC
TGTAAATTTCCGCTGGGAGCTTATGCTACCGTCGAAAGCGACGAAGTAAACCTGCACGTAATGCTGGGCAATCATCACAC
CGGACAGATTATCCGTATGCATGAAACCAGCACAGTAGCTGATGCCGAAAAGCTGGGTCAAAAACTGGGTGAAGCCATCA
TTGCCGAAGCTGAAAAGCAGGGAATAGAGATTTTGAGGTAA

Protein sequence : 
MSKKFVVATRPSLLAYTQTQQTVDLLRVKNPDCEFEIVKISTHGDTVTDKPLTAFGGTGVFVKELENALYEGKAHFAIHS
LKDVPSIQPEGLVLAAFPTRQDPRDLLLTRGGVSVADLPSPCVIGTGSPRRMVQVAKLKEQITFADLRGNIDTRLKKLED
GQYDAIVLAAAGLKRLGKEIAESAYMPTDVCLPAIGQGAIAIECRADDAETIAMLKSINDAATETAIVAERSYMKTIGGG
CKFPLGAYATVESDEVNLHVMLGNHHTGQIIRMHETSTVADAEKLGQKLGEAIIAEAEKQGIEILR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00327 YP_008207792.1 Porphobilinogen deaminase Not tested AbaR25 Protein 9e-52 41
BJAB0868_00331 YP_008211657.1 Porphobilinogen deaminase Not tested AbaR26 Protein 9e-52 41