Gene Information

Name : Palpr_2245 (Palpr_2245)
Accession : YP_004043366.1
Strain : Paludibacter propionicigenes WB4
Genome accession: NC_014734
Putative virulence/resistance : Virulence
Product : pyruvate kinase
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG0469
EC number : 2.7.1.40
Position : 2737516 - 2738958 bp
Length : 1443 bp
Strand : -
Note : COGs: COG0469 Pyruvate kinase; InterPro IPR015793: IPR015794: IPR001697: IPR018209; KEGG: bth:BT_2841 pyruvate kinase; PFAM: Pyruvate kinase barrel; Pyruvate kinase alpha/beta; PRIAM: Pyruvate kinase; SPTR: Pyruvate kinase; TIGRFAM: pyruvate kinase; PFAM:

DNA sequence :
ATGTCTAAATCAACAAAAATTGTTGCTACCATTAGCGACTTGCGCTGCGAAGTAGATTTTATCCGTTCGTTGTATAACGA
AGGAATGAACGTTGTTCGCATGAATTCTGCCCACTTGCAACGTGAAGGATTTGAAAGAATTGTAAATAATGTTCGCGCCG
TAAGCAACCAAATTGCTATCCTTATGGATACAAAAGGTCCTGAAATCAGAACCACAGTAGTTGAAAATGATTCAATCGAC
CTGTCAACAGGTGACACGGTAAAAATAACCGGAAACCCTGACTTAATGTCAACACGTGAATGTATTTCTGTAAATTATCC
TCACTTCGTTCGTGATTTGAACGTGGGTGACAATATCCTTTTTGACGATGGAGAAATTGATCTTCAAGTTGACTCAAAAG
ATGATCAATACTTGTATTGTACCGTGCTTAACAACGGAAATCTTGGAAGCCGTAAGAGTGTGAATGTACCGGGCGTACGC
ATCAATTTGCCTTCGCTTACTGAAAAAGACCGTAAAAACATTTTGTTGGCTATCGAATTAGACCTTGATTTCATTGCTCA
CTCATTCGTTAGAAACAAACAAGATCTTATCGATATTCAAACTATCCTTGATGAGCACAACAGCCCAATTAAAATTATCT
CAAAAATTGAAAACCAAGAAGGTGTTGACAACATTGATGAGATTCTGGAACACACATACGGTGTTATGATTGCTCGTGGT
GACCTGGGTATTGAAGTTGCACAGGAAAAAATTCCGGGTATTCAACGTCGTCTTATCCGCAAATGTGTTGTGGCTCGCAA
GCCGGTTATCGTAGCTACTCAAATGCTACACACCATGATTAAAAACCCACGTCCTACACGTGCCGAAATTACAGATATTG
CAAACGCAATTTATTATCGCACAGATGCAGTGATGCTCAGCGGCGAAACTGCTTACGGAAAATATCCGGTAGAAGCTGTT
AGAACAATGGCAAGTGTGGCTAAAGAAGCTGAGAAAACCAAACTGACCGAAAATGATATCCCTGTAAACATCGGTACTAA
CGATATTACTTCGTTCCTGGCAAACGCTGCTAACGAAGCAAGTATCAATCTTGGCACTAAAGCTATCATAACAGATACAT
ACACCGGCAAAACAGCTCTTAATTTGTCTGCATACCGTAGTACTAATCCTATTCTGGCACTTTGCTACCATGAGCGTTCA
ACTCGTCAGTTGGCTTTATCTTATGGCGTTTTCCCTGTATTCCAGGAAGAAAAAGGAAATACTCAGAAGTATTTCATTGC
CGGGCTACAAGGATTTATCAAACAAGGCATGCTTGAACCTGAAGACTATGTAAGTTACCTGAGCGGCAGCTTCGGCTCCG
GATTCGGAACTTCATTCCTCGAAATTAATCAGGTTAGTAAAATCTTCGAATCTCGAGAAAAATACATACTTCCAAATTTC
TAA

Protein sequence :
MSKSTKIVATISDLRCEVDFIRSLYNEGMNVVRMNSAHLQREGFERIVNNVRAVSNQIAILMDTKGPEIRTTVVENDSID
LSTGDTVKITGNPDLMSTRECISVNYPHFVRDLNVGDNILFDDGEIDLQVDSKDDQYLYCTVLNNGNLGSRKSVNVPGVR
INLPSLTEKDRKNILLAIELDLDFIAHSFVRNKQDLIDIQTILDEHNSPIKIISKIENQEGVDNIDEILEHTYGVMIARG
DLGIEVAQEKIPGIQRRLIRKCVVARKPVIVATQMLHTMIKNPRPTRAEITDIANAIYYRTDAVMLSGETAYGKYPVEAV
RTMASVAKEAEKTKLTENDIPVNIGTNDITSFLANAANEASINLGTKAIITDTYTGKTALNLSAYRSTNPILALCYHERS
TRQLALSYGVFPVFQEEKGNTQKYFIAGLQGFIKQGMLEPEDYVSYLSGSFGSGFGTSFLEINQVSKIFESREKYILPNF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
pykF NP_805051.1 pyruvate kinase Not tested SPI-2 Protein 4e-73 42
pykF CAA68205.1 pyruvate kinase like protein Not tested SPI-2 Protein 3e-72 42
STY1744 NP_456147.1 pyruvate kinase Not tested SPI-2 Protein 8e-73 42
pykF YP_216386.1 pyruvate kinase Not tested SPI-2 Protein 4e-73 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Palpr_2245 YP_004043366.1 pyruvate kinase VFG0479 Protein 2e-73 42