Gene Information

Name : Palpr_1806 (Palpr_1806)
Accession : YP_004042930.1
Strain : Paludibacter propionicigenes WB4
Genome accession: NC_014734
Putative virulence/resistance : Resistance
Product : protein-tyrosine phosphatase, low molecular weight
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0394
EC number : 1.20.4.1
Position : 2167806 - 2168231 bp
Length : 426 bp
Strand : +
Note : COGs: COG0394 ProteiN-tyrosine-phosphatase; InterPro IPR017867; KEGG: bth:BT_0115 arsenate reductase; PFAM: ProteiN-tyrosine phosphatase, low molecular weight; SMART: ProteiN-tyrosine phosphatase, low molecular weight; SPTR: Arsenate reductase; PFAM: Low

DNA sequence : 
ATGAAAATATTAATACTTTGCACCGGAAATAGCTGCCGCAGTCAAATGGCACACGGCTTCCTACAATCGTTCGACTCCTC
CATCACAGTTTGTTCTGCCGGAACTCAAGCCTCAGGTAAACTTAATCAAAAGGCTGTTGCCGTAATGAAAGAAGCTGGAG
TAGACATTAGCAACCACACTTCAGATTCGGTAGACAAATACCTGAAAGAGGAATGGGATTATGTAATTACCGTTTGTGGA
GGTGCCAACGAAGAGTGTCCGGCATTTTTTGGAAAGGTAAAACATCGCTTACACATGGGTTACGACGACCCAAGCCATGC
CGAAGGAACAGAAGAATTTATCCGAAGCGAGTTTGTACGCGTTCGCGACGAAATCAAAGAAGGTTTCTATAAGTTCTATA
TAGAACAAATTAGACCTCAGTTATGA

Protein sequence : 
MKILILCTGNSCRSQMAHGFLQSFDSSITVCSAGTQASGKLNQKAVAVMKEAGVDISNHTSDSVDKYLKEEWDYVITVCG
GANEECPAFFGKVKHRLHMGYDDPSHAEGTEEFIRSEFVRVRDEIKEGFYKFYIEQIRPQL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
arsC YP_005754064.1 arsenate reductase Not tested Type-XI SCCmec Protein 6e-16 48
arsC YP_252023.1 arsenate reductase Not tested SCCmec Protein 1e-16 46
arsC YP_252016.1 arsenate reductase Not tested SCCmec Protein 2e-15 46

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Palpr_1806 YP_004042930.1 protein-tyrosine phosphatase, low molecular weight BAC0581 Protein 3e-18 50
Palpr_1806 YP_004042930.1 protein-tyrosine phosphatase, low molecular weight BAC0032 Protein 3e-17 48
Palpr_1806 YP_004042930.1 protein-tyrosine phosphatase, low molecular weight BAC0580 Protein 1e-16 46