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Name : Palpr_1280 (Palpr_1280) Accession : YP_004042412.1 Strain : Paludibacter propionicigenes WB4 Genome accession: NC_014734 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : 6.1.1.11 Position : 1544206 - 1545477 bp Length : 1272 bp Strand : - Note : COGs: COG0172 SeryL-tRNA synthetase; InterProIPR002317: IPR006195: IPR018156: IPR015866: IPR 002314; KEGG: pgi:PG0316 seryL-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); SeryL-tRNA synthetase, class IIa-like; PRIAM: Serine--tRNA ligase; S DNA sequence : ATGTTGACACTCAAATATATCACCGAAAATACCGAAGAAGTAATTGTTCGGTTGGCAAAGAAGAATTTCGACGGAGCTGA TATTATTGCTCAAGTAGTAGAATTGGATAATGTGCGTAAAACAACTCAGGTTAAGGTTGATACTGCCTCGGCCGAGTTGA ATAACTTATCGAAGGAAATCGGGTTGCTTTTCAAACAAGGAAAGCAAGATGAAGCTGCTCAGGCCAAAGAAAAAACGGTA GAATTAAAGGAAAGCATTAAAGTACTGGGTGATCAACAAACAGCAGCAGAACTTAAACTCAACGAATTGCTGGTTCAGAT TCCAAATCTACCACACGAAAGTGTGCCCGCTGGAAAGCATGCTGAGGATAATTTAATTGAGCGAACCGGTGGCGTTATGC CAAATTTACACGCCGATGCTGTACCTCACTGGGATTTAGCGAAAAAATATGATTTGATTGATTTTGAATTGGGTGTAAAA ATATCAGGTGCAGGCTTTCCAGTCTATAAAGGCAAAGGAGCCCGTTTGCAACGTGCGTTGATCAACTTTTTCCTCGACAA TGCGCGTGAAGCAGGTTACCTGGAAGTTCAACCACCTTATGTGGTAAATGCAGCTTCGGGTTATGGCACAGGTCAGTTGC CGGACAAAGAGGGTCAGATGTACCACTGCACGGTGGATGATTTGTATCTGATTCCAACGGCAGAAGTGCCCGTTACAAAT ATTTATCGGGATGTGATTTTGAATGAAAGTGAGCTGCCAATCAGAAATACAGCTTATTCTGCTTGTTTCCGCCGCGAAGC AGGTTCTTATGGTAAAGATGTACGTGGTCTTAACCGACTTCATCAGTTCGACAAAGTAGAAATTGTACAGATTCAACATC CTGACAAGTCCTATGAAACACTTGATCAGATGGTGAATTACGTGCAGACATTGGTTGACAAACTGGAATTGCCTTGGCGT ATTCTTCGCCTGTGTGGAGGTGATATGAGCTTCACTTCGGCTTTGACATTTGACTTTGAAGTTTTTTCAGCTGCTCAGGA GCGTTGGCTGGAAGTTAGTTCGGTTTCAAATTTTGAAAGTTATCAGGCCAATCGTTTGAAATGTCGTTTCAGAACTGCAG ATAAGAAAACTCAACTTTGCCATACGCTGAATGGAAGTGCCATGGCATTGCCGCGTATAGTGGCTGCATTGCTTGAAAAC AACCAAACACCGGAAGGTATTCGCATACCAAAAGCGTTGATTCCTTATACTGGATTTGATCTAATCGACTAA Protein sequence : MLTLKYITENTEEVIVRLAKKNFDGADIIAQVVELDNVRKTTQVKVDTASAELNNLSKEIGLLFKQGKQDEAAQAKEKTV ELKESIKVLGDQQTAAELKLNELLVQIPNLPHESVPAGKHAEDNLIERTGGVMPNLHADAVPHWDLAKKYDLIDFELGVK ISGAGFPVYKGKGARLQRALINFFLDNAREAGYLEVQPPYVVNAASGYGTGQLPDKEGQMYHCTVDDLYLIPTAEVPVTN IYRDVILNESELPIRNTAYSACFRREAGSYGKDVRGLNRLHQFDKVEIVQIQHPDKSYETLDQMVNYVQTLVDKLELPWR ILRLCGGDMSFTSALTFDFEVFSAAQERWLEVSSVSNFESYQANRLKCRFRTADKKTQLCHTLNGSAMALPRIVAALLEN NQTPEGIRIPKALIPYTGFDLID |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 2e-70 | 44 |
