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Name : Palpr_0979 (Palpr_0979) Accession : YP_004042114.1 Strain : Paludibacter propionicigenes WB4 Genome accession: NC_014734 Putative virulence/resistance : Virulence Product : nucleotide sugar dehydrogenase Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG0677 EC number : - Position : 1176111 - 1177400 bp Length : 1290 bp Strand : - Note : COGs: COG0677 UDP-N-acetyL-D-mannosaminuronate dehydrogenase; InterPro IPR001732: IPR014026: IPR014027: IPR017476; KEGG: cpi:Cpin_4763 nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP-glucose/GDP-mannose dehydrogenase dimer DNA sequence : ATGAAAGAATTTAGAATTGCTGTTGTCGGGCTGGGTTATGTGGGTTTACCACTTGCTATTGAGTTTGGCAAAAAGTATAA AGTACTTGGATACGATATAGATAAAAACAGGGTTGGTGAATTGCAACAAGGCGTTGATCACACTTTGGAAGCCGATCTGG ATGGTTTGCATGAGGCTACAGCTCTTTGTAGCTCAAACCCTAATTTCGGCTTGTCATTTTCGAGCAATGAAATCGACCTG AAAGAGTACAATACTTTTATAGTAACTGTCCCCACACCAATCAATAAATTCAATATGCCTGATCTGAAGCCGCTTATAAT GGCTTCGGAAATGCTTGGGCGTGTCATAAGCAATGATGCCATTGTAATTTATGAGTCAACCACATACCCCGGTTGTACTG AAGAAGACTGCATCCCTGTTATAGAAAAAGTCTCAGGGCTCAAATTCAATAAAGATTTTTATGCGGGTTATAGTCCGGAA CGCATAAATCCCGGCGATAAAGTAAACACGCTTACCAAAATTAAAAAAGTTACCTCCGGCTCCACTCCACTTATTGCCGA TCAGGTAGATAATTTATACTCCTCAATCATTACAGCCGGAACGCATAAAGCCCCCAGCATAAAAGTAGCAGAAGCATCGA AAATTATAGAAAATGCTCAGCGTGATGTGAATATCTCTTTCGTCAATGAATTAGCCCTTATTTTCGATAAAGTAGGCATT GATACCAACGATGTGATTGATGCTGCCGGAACTAAATGGAACTTTTTAAAGTACCGACCGGGGCTTGTCGGTGGACATTG TATCAGTGTGGATCCTTATTATTTGGCTAGTAAGGCGGAATCGTTGGGTTATGTGCCTCAGGTAATACTCTCAGGTCGGC ACGTAAACAACAGTATTGCGCCTTTTATTGCCAATAAAGTGTTGAAATTGATGATACAGAAGATACATGCCATAAAAGGT TCTAATGTACTGATGCTAGGTGTGACTTTTAAAGAAAATTGTCCGGACATACGCAATACCAAGGTGGTTGATATTTATCG GGAATTGTGTGAATTTGGGTTGAATGTGGATATCTATGATCCGTGGGCATCAGTGGCGGAAGTAAAGCATGAATATGGTG TGGATATTATAGATAAGGTAGATGGTAAAAAGAAATATGATGCTGTTTTACTGGCTGTGGCGCATGATGAATTTAAAACA ATAGATTTCGAGAAGTACTATAAGGCCGGTTCTGTCGTTTTTGATGCGAAAGCTGTAATCGACAGGCGATGGGTGGATGG AAGACTTTAG Protein sequence : MKEFRIAVVGLGYVGLPLAIEFGKKYKVLGYDIDKNRVGELQQGVDHTLEADLDGLHEATALCSSNPNFGLSFSSNEIDL KEYNTFIVTVPTPINKFNMPDLKPLIMASEMLGRVISNDAIVIYESTTYPGCTEEDCIPVIEKVSGLKFNKDFYAGYSPE RINPGDKVNTLTKIKKVTSGSTPLIADQVDNLYSSIITAGTHKAPSIKVAEASKIIENAQRDVNISFVNELALIFDKVGI DTNDVIDAAGTKWNFLKYRPGLVGGHCISVDPYYLASKAESLGYVPQVILSGRHVNNSIAPFIANKVLKLMIQKIHAIKG SNVLMLGVTFKENCPDIRNTKVVDIYRELCEFGLNVDIYDPWASVAEVKHEYGVDIIDKVDGKKKYDAVLLAVAHDEFKT IDFEKYYKAGSVVFDAKAVIDRRWVDGRL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tviB | NP_458740.1 | Vi polysaccharide biosynthesis protein, UDP-glucose/GDP-mannose dehydrogenase | Virulence | SPI-7 | Protein | 2e-105 | 52 |
| tviB | NP_807945.1 | VI polysaccharide biosynthesis UDP-glucose/GDP-mannose dehydrogenase | Virulence | SPI-7 | Protein | 2e-105 | 52 |
| cap1L | AAA64651.1 | type 1 capsule synthesis gene | Virulence | SCCcap1 | Protein | 2e-97 | 52 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Palpr_0979 | YP_004042114.1 | nucleotide sugar dehydrogenase | VFG0431 | Protein | 7e-106 | 52 |
