Gene Information

Name : ompR (MPQ_0415)
Accession : YP_004038834.1
Strain : Methylovorus sp. MP688
Genome accession: NC_014733
Putative virulence/resistance : Virulence
Product : two component heavy metal response transcriptional regulator, winged helix family
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 409664 - 410470 bp
Length : 807 bp
Strand : -
Note : -

DNA sequence : 
ATGCTGACCAGCATGGCATGGCTGACCCGACAGCCAGCTGACATCCAGATTACATTTTTGTCATCTTGCTGCCAGGCAGC
ATGGTTTGCGGCACAATCACTGTCTACACCACCACCTGACCACTCCATGCGAATTCTTGTAGTCGAGGATGAACACAAAA
CCGGCGAGTATCTGCGCAAAGGCCTGACCGAGGCGGGCTTTGTCACGGACCTGGTCCATGATGGCCTGGATGGGCAACAT
ATGGCGCTGGCTGAACATTACGACCTGATTATTCTGGATGTGATGCTGCCACGCGCCAGTGGCTGGCAGATCATCGCTGC
CCTGCGTGAGGCGGGCAAGCATACGCCCGTGCTTTTTCTGACGGCGCGTGACCTGGTGGAAGACCGCGTGAAAGGCCTGG
AACTGGGCGCGGATGACTACCTGGTCAAACCGTTTGCCTTTTCTGAATTGCTGGCCCGTATACGCACGCTACTGCGGCGC
GGCAGAACGCGCGAAGCCGATGTGCTGCAAGTTGCCAATCTTGAAATCGATGTGCTGCGGCGGCGCGTGCAGCGCGATGG
CAAGAAAATCGAGCTCACGGCCAAGGAATTTGGACTGCTGGAATTGCTGGTGCGTCGGCGTGGTGAAGTGTTATCGCGCT
CGCTGATTGCCTCGCAGGTGTGGGACATGAATTTTGACAGCGACACCAATGTGATCGAGGTGGCCATGCGGCGCCTGCGC
GCCAAGATTGATGATCCGTTCGAGCCCAAGCTGATTCACACCGTGCGCGGCATGGGCTATGTGCTGGATGTGCCCGAGGC
ACCATGA

Protein sequence : 
MLTSMAWLTRQPADIQITFLSSCCQAAWFAAQSLSTPPPDHSMRILVVEDEHKTGEYLRKGLTEAGFVTDLVHDGLDGQH
MALAEHYDLIILDVMLPRASGWQIIAALREAGKHTPVLFLTARDLVEDRVKGLELGADDYLVKPFAFSELLARIRTLLRR
GRTREADVLQVANLEIDVLRRRVQRDGKKIELTAKEFGLLELLVRRRGEVLSRSLIASQVWDMNFDSDTNVIEVAMRRLR
AKIDDPFEPKLIHTVRGMGYVLDVPEAP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 3e-47 58
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 7e-48 54

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ompR YP_004038834.1 two component heavy metal response transcriptional regulator, winged helix family BAC0638 Protein 1e-55 70
ompR YP_004038834.1 two component heavy metal response transcriptional regulator, winged helix family BAC0083 Protein 2e-55 69
ompR YP_004038834.1 two component heavy metal response transcriptional regulator, winged helix family BAC0197 Protein 9e-57 68
ompR YP_004038834.1 two component heavy metal response transcriptional regulator, winged helix family BAC0308 Protein 2e-55 67
ompR YP_004038834.1 two component heavy metal response transcriptional regulator, winged helix family BAC0125 Protein 2e-55 67
ompR YP_004038834.1 two component heavy metal response transcriptional regulator, winged helix family BAC0111 Protein 2e-57 65
ompR YP_004038834.1 two component heavy metal response transcriptional regulator, winged helix family BAC0347 Protein 1e-49 61
ompR YP_004038834.1 two component heavy metal response transcriptional regulator, winged helix family HE999704.1.gene1528. Protein 1e-25 44
ompR YP_004038834.1 two component heavy metal response transcriptional regulator, winged helix family AE000516.2.gene3505. Protein 2e-22 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ompR YP_004038834.1 two component heavy metal response transcriptional regulator, winged helix family VFG0596 Protein 1e-47 58
ompR YP_004038834.1 two component heavy metal response transcriptional regulator, winged helix family VFG1390 Protein 2e-33 46