Gene Information

Name : MPQ_2417 (MPQ_2417)
Accession : YP_004040797.1
Strain : Methylovorus sp. MP688
Genome accession: NC_014733
Putative virulence/resistance : Virulence
Product : winged helix family two component transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 2478859 - 2479530 bp
Length : 672 bp
Strand : -
Note : -

DNA sequence : 
ATGCGGGTTTTGCTAGTGGAAGACGACGCCGTACTCGGTGATGCCATTCATCGCTCGCTGATCAAATCCGGCTATGCGGT
GGACTGGACGCAGGACGGGCAGCAGGCGGATGTGGCGCTGCATGAGCAAGTCTACGATGCGGTGGTGTTGGACCTGGGTC
TGCCGCGCATGGATGGCCTCGAGGTGTTGCGGCGCCTGCGTCAGCGCAAACAGCTGGTGCCGGTAGTGATACTCTCGGCG
CGCGAGGGGCTGGATGACCGGGTACACGGACTGGATCTGGGTGCGGATGATTATCTGACCAAGCCTTTCAAGCTGCCAGA
GCTGGAAGCGCGGTTGCGGGCGCAGATACGTCGCAGTCATCAGGTGGTGACGTCGTATATAGATTTTGGCCCCATGCGTT
TCGATAGCACTGACCGCACAGTGACGGTCAATGGTGCGCTGGTGGAGTTTTCGCAGCGGGAGTTGAGCGTGCTGGAAGCG
CTGATCTTGCGCAGCGGGCGCGTGGTGAGCAAGGAGTCGCTGGTGGAAAATCTGTGCAACTGGGATGTCGACGTCGGCAA
CAATGCCATCGAGGTGTATGTCCACCGCCTGCGTAAAAAGCTGGAGCCCTACGGCATCCTGATCCGCACGGTGCGTGGTC
TGGGCTATCTCCTGGAAAAGCAGTCGGCATGA

Protein sequence : 
MRVLLVEDDAVLGDAIHRSLIKSGYAVDWTQDGQQADVALHEQVYDAVVLDLGLPRMDGLEVLRRLRQRKQLVPVVILSA
REGLDDRVHGLDLGADDYLTKPFKLPELEARLRAQIRRSHQVVTSYIDFGPMRFDSTDRTVTVNGALVEFSQRELSVLEA
LILRSGRVVSKESLVENLCNWDVDVGNNAIEVYVHRLRKKLEPYGILIRTVRGLGYLLEKQSA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
armR AAN62112.1 putative response-regulator ArmR Not tested PAGI-2(C) Protein 9e-28 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
MPQ_2417 YP_004040797.1 winged helix family two component transcriptional regulator NC_002516.2.879194.p Protein 2e-24 42
MPQ_2417 YP_004040797.1 winged helix family two component transcriptional regulator CP001138.1.gene1939. Protein 5e-26 42
MPQ_2417 YP_004040797.1 winged helix family two component transcriptional regulator BAC0487 Protein 2e-29 42
MPQ_2417 YP_004040797.1 winged helix family two component transcriptional regulator BAC0083 Protein 3e-27 41
MPQ_2417 YP_004040797.1 winged helix family two component transcriptional regulator CP001918.1.gene2526. Protein 2e-25 41
MPQ_2417 YP_004040797.1 winged helix family two component transcriptional regulator CP000647.1.gene1136. Protein 1e-24 41
MPQ_2417 YP_004040797.1 winged helix family two component transcriptional regulator BAC0530 Protein 2e-24 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
MPQ_2417 YP_004040797.1 winged helix family two component transcriptional regulator VFG0475 Protein 4e-26 42
MPQ_2417 YP_004040797.1 winged helix family two component transcriptional regulator VFG0473 Protein 7e-29 41
MPQ_2417 YP_004040797.1 winged helix family two component transcriptional regulator VFG1389 Protein 1e-23 41