Gene Information

Name : kdpB (MPQ_1113)
Accession : YP_004039513.1
Strain : Methylovorus sp. MP688
Genome accession: NC_014733
Putative virulence/resistance : Unknown
Product : k+-transporting ATPase B
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG2216
EC number : -
Position : 1112214 - 1114289 bp
Length : 2076 bp
Strand : -
Note : -

DNA sequence :
ATGCATTCCCCCAAAGGCCTTTCCATGTTCGATACGCAGCTGATACTGCCTGCCATCGCACTTTCCTTCAAAAAACTGGC
GCCGCAGGTGCAATGGCGCAACCCGGTCATGTTCGTCGTTTATCTGGGCAGCATGCTCACCACGCTCATGTTCATCCAGG
CGCTGGTGCTTGAGTCGCATGGCAGCCATGGCGAAGCCCCGGCGGGCTTTATCCTGGCGATCAGCATCTGGCTGTGGTTT
ACCGTGCTGTTTGCCAACTTTTCCGAAGCCCTGGCTGAGGGCCGCAGCAAAGCTCAGGCGGCCGCCCTGCGCAGCGCCAA
GCAGAATGTGCCCGCCAAAAAACTGGCCAGCGCCTCACGCCAGGCAACCATCAGCATCACCGATAGCCAGAGCCTGCGCA
AAGGCGACATTGTGCTGGTGGAAGCCGGGGACATGATCCCGGCCGATGGCGAGGTGCTGGAAGGCATTGCCTCGGTGAAT
GAAGCCGCCATCACGGGTGAATCAGCCCCGGTCATCCGCGAATCCGGCGGCGATTTCAGCGCTGTTACCGGCGGCACCCA
GGTGTTGTCGGACTGGCTGGTGGTGCGCATCAGCGTCAATCCGGGCGAGGCTTTTCTGGATCGCATGATCGCCATGGTGG
AAGGCGCCAAACGCCAGAAAACCCCCAATGAAATCGCGCTGACCATACTGCTGGTAGCGCTGACCATTGTCTTTCTGCTG
GCAACCGTCACCCTGCTGCCGTTCTCCCTCTTCAGCGTGCATGCAGCCGGAGCAGGCGCCCCTGCCAGCATCACCGTGCT
GGTCGCGCTCGTGGTCTGCCTGATTCCCACCACCATTGCCGGTTTGCTTTCGGCGATTGGCGTGGCGGGCATGAGCCGCA
TGATGCAGGCTAATGTCATCGCCACCTCGGGCCGCGCAGTGGAGGCGGCTGGCGATGTGGATGTGCTGCTGCTGGACAAG
ACCGGCACCATTACGCTGGGCAACCGGCAGGCATCCATGTTTCTGCCTGCACCCGGCATCAGCGAGCAACAGCTGGCCGA
TAGCGCACAGCTGGCTTCGCTGGCCGACGAGACGCCGGAGGGCCGCAGCATTGTCGTGCTGGCAAAAAACCGTTTCGCCC
TGCGCGAGCGTGATCTGCAGGGCCTGCAAGCCGAGTTCGTGCCATTCTCCGCACAAACCCGCATGAGCGGCGTCAACCTC
GGCACCAGACAGATTCGCAAAGGCGCCGCCTCGGCGATTCGCAGCTGGGTGGAATCGCAGGGCGGAAAATTTGCCCATGA
AGTCAACCAGATGGTGGACGATATCGCCCGCCGTGGCAGCACCCCGCTGGTGGTAGCCGACGACGCCCGCGTGATGGGCG
TGGTTGAGCTGAAAGATGTGGTGAAAGGCGGCATCAAGGAACGCTTTGCCGAGCTGCGCAACATGGGCATCAAAACCGTG
ATGATCACCGGCGATAACCGTCTCACGGCCGCCGCCATTGCCGCCGAAGCGGGCGTGGATGACTTTCTGGCCGAAGCCAC
GCCGGAAGCCAAGCTCAAGCTGATACGCGAGCATCAATCAGCGGGCAAGCTGGTAGCGATGACCGGCGACGGCACCAACG
ATGCCCCCGCGCTGGCGCAGGCCGATGTTGCGGTCGCCATGAACACCGGCACCCAGGCCGCCAAGGAAGCCGGCAACATG
GTGGATCTCGACTCCAACCCGACCAAGCTGATTGAGATCGTGGAGATCGGCAAGCAGATGCTGATGACGCGTGGCTCGCT
CACCACGTTCAGCATTGCCAACGATATTGCCAAGTATTTCGCCATCATCCCGGCCGCGTTTGCCAGTACTTATCCGCAGC
TCAACACGCTGAATGTCATGCACCTCGCCAGTCCGGAGTCGGCGATTTTATCGGCGGTGATTTTCAATGCGCTGGTCATC
ATGTTTCTGATTCCGCTGGCGCTGAAAGGCGTGCCCTATCGCGCCGCCAGTGCCGCCAGCCTGCTGCGTGGCAATCTGCT
GATCTACGGCGTAGGCGGTGTGGTGGTGCCTTTTGTCGGCATCAAGCTGATCGACCTGTTGCTGCAAATGCTCTAG

Protein sequence :
MHSPKGLSMFDTQLILPAIALSFKKLAPQVQWRNPVMFVVYLGSMLTTLMFIQALVLESHGSHGEAPAGFILAISIWLWF
TVLFANFSEALAEGRSKAQAAALRSAKQNVPAKKLASASRQATISITDSQSLRKGDIVLVEAGDMIPADGEVLEGIASVN
EAAITGESAPVIRESGGDFSAVTGGTQVLSDWLVVRISVNPGEAFLDRMIAMVEGAKRQKTPNEIALTILLVALTIVFLL
ATVTLLPFSLFSVHAAGAGAPASITVLVALVVCLIPTTIAGLLSAIGVAGMSRMMQANVIATSGRAVEAAGDVDVLLLDK
TGTITLGNRQASMFLPAPGISEQQLADSAQLASLADETPEGRSIVVLAKNRFALRERDLQGLQAEFVPFSAQTRMSGVNL
GTRQIRKGAASAIRSWVESQGGKFAHEVNQMVDDIARRGSTPLVVADDARVMGVVELKDVVKGGIKERFAELRNMGIKTV
MITGDNRLTAAAIAAEAGVDDFLAEATPEAKLKLIREHQSAGKLVAMTGDGTNDAPALAQADVAVAMNTGTQAAKEAGNM
VDLDSNPTKLIEIVEIGKQMLMTRGSLTTFSIANDIAKYFAIIPAAFASTYPQLNTLNVMHLASPESAILSAVIFNALVI
MFLIPLALKGVPYRAASAASLLRGNLLIYGVGGVVVPFVGIKLIDLLLQML

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ef0088 AAM75291.1 EF0088 Not tested Not named Protein 2e-170 64
kdpB NP_814334.1 potassium-transporting ATPase subunit B Not tested Not named Protein 3e-170 64
kdpB YP_251949.1 potassium-transporting ATPase subunit B Not tested SCCmec Protein 5e-142 56
kdpB BAA82181.1 potassium-transporting ATPase(B chanin) Not tested Type-II SCCmec Protein 8e-141 55
SAR0071 YP_039539.1 potassium-transporting ATPase subunit B Not tested Type-II SCCmec Protein 1e-140 55
kdpB(SCCmec) NP_370597.1 potassium-transporting ATPase subunit B Not tested Type-II SCCmec Protein 1e-140 55
kdpB NP_373310.1 potassium-transporting ATPase subunit B Not tested Type-II SCCmec Protein 1e-140 55
kdpB YP_190029.1 potassium-transporting ATPase subunit B Not tested Type-II SCCmec Protein 1e-140 55