Gene Information

Name : Hbor_34580 (Hbor_34580)
Accession : YP_004038115.1
Strain :
Genome accession: NC_014731
Putative virulence/resistance : Unknown
Product : short-chain alcohol dehydrogenase
Function : -
COG functional category : I : Lipid transport and metabolism
COG ID : COG1028
EC number : -
Position : 182946 - 183719 bp
Length : 774 bp
Strand : -
Note : PFAM: short chain dehydrogenase

DNA sequence :
ATGTCACTTTTGGAAGGCAAGACGGCAGTCATCACGGGCAGTTCCGGCGGCATCGGTCGCGGTATCGCGCGAACGTTCGC
TGACCACGGAGCGTCAGTGGTCGTTGCCGACATCAGTGAAGAGCCTCGCGAGGGCGGCACGCCGACGCACGAACTCCTGC
AGGAGGAAGGTGCGGAGTCGATGTACGTCGAGTGTGACGTGAGCGATTACGACGATTGCGTAGCCGCCGTCGAGGCGGCC
GATGAGTTCGGCGGTATCGACGTGATGGTGAACAACGCGGGTATCGTCGGTCCACAGGACCCACTCGTGGATATCGACTT
AGAAGACTACCGTAACCTGATTTCGATCAACCTCGATGGCGTGGTCCACGGGTCGAAGGCGGCCGCGTTGGCGATGCTCG
AACAAGGAGTACACGGAAGTATCGTCAACATGTCAAGCGTCGCCGGAATAACCGGCTTCGGTGGAATCACCCCGTACTCC
GCCGCGAAGGGCGGCGTCCGCTCGTTCACTTACGCACTTGCGAGCGAACTCGGTCCTGACGGAATCCGCGTGAACGCAGT
CCATCCCGGCATCATCGAAACGACGATGACGACGGAAGACTCGCCCTTCGTCGGAACCGAGCAGGAAGAAAAGATGCTGC
CGACGATTCCGCTCCGCCGCGTCGGCCAACCTGAAGACGTGGCAGGTGTCGTCACGTTCCTCGCCAGCGACTTGGCCTCC
TACGTCACTGCTGAGTCGGTCATTGTTGACGGCGGCCAACTGAACACCCAATAA

Protein sequence :
MSLLEGKTAVITGSSGGIGRGIARTFADHGASVVVADISEEPREGGTPTHELLQEEGAESMYVECDVSDYDDCVAAVEAA
DEFGGIDVMVNNAGIVGPQDPLVDIDLEDYRNLISINLDGVVHGSKAAALAMLEQGVHGSIVNMSSVAGITGFGGITPYS
AAKGGVRSFTYALASELGPDGIRVNAVHPGIIETTMTTEDSPFVGTEQEEKMLPTIPLRRVGQPEDVAGVVTFLASDLAS
YVTAESVIVDGGQLNTQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAT96227.1 putative short-chain type regulator Not tested T-PAI Protein 9e-22 41
unnamed AAT96098.1 putative short-chain type regulator dehydrogenase Not tested T-PAI Protein 8e-22 41
unnamed AAT96175.1 putative short-chain type regulator Not tested T-PAI Protein 6e-22 41
unnamed AAT96054.1 putative short-chain type regulator Not tested T-PAI Protein 3e-22 41
unnamed AAT96115.1 putative short-chain type regulator Not tested T-PAI Protein 3e-23 41