Gene Information

Name : Hbor_16990 (Hbor_16990)
Accession : YP_004036712.1
Strain : Halogeometricum borinquense DSM 11551
Genome accession: NC_014729
Putative virulence/resistance : Unknown
Product : nucleotide sugar dehydrogenase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG1004
EC number : -
Position : 1626148 - 1627440 bp
Length : 1293 bp
Strand : +
Note : PFAM: UDP-glucose/GDP-mannose dehydrogenase, NAD binding domain; UDP-glucose/GDP-mannose dehydrogenase, central domain; UDP-glucose/GDP-mannose dehydrogenase, UDP binding domain; TIGRFAM: nucleotide sugar dehydrogenase

DNA sequence :
ATGGAAATCAGTATCATCGGCAGTGGGTACGTTGGAACGACTATCGCCGCCTGCTTCGCTGATGTCGGCCACAACGTGGT
GAACGTGGACATCGACGAGGAGATCGTAGAGACGCTGAACAGCGGCAACTCGCCAATCCACGAACCCAGCCTCGACGAAC
GTATCGAAGAGCACGCCGGAGACCGACTCCGCGCGACCACCGACTACGATGCCATTCTCGACACCGACGTGACGTTCCTC
GCCCTCTCGACACCCTCCACGGACGACGGCCACATCGATCTCTCGGTGATGGAGGCAGGGGCGAAATCGCTCGGCGCGAC
GCTCGCGGAGAAAGACGACTACCACCTCGTCGTCACGAAAAGTACTGTCGTGCCGACGACGACGGAAGAGGTTATCGCCC
CGATTCTCGAAGAACACTCGGGCAAGACCGTCGGTGAGGACTTCGATGTGGGGATGAACCCCGAGTTCCTCCGCGAGGGG
TCGGCCGTAGACGACTTCCTCGACCCCGACAAGGTCGTCCTCGGGTCACACACCGACCGCGCGGCCGAACGACTTCGCGG
CGTGTTCGACCCGCTCCTCGAACGCGCACCGGACGCCTCTCTCGTTGAGACGGGCATCCGCGAGGCCGAGATGATCAAGT
ACGCCAACAACGCGTTCCTCGCAGCGAAGATTTCGCTCGTCAACGACCTCGCTAACATCTGCAAAGAGTACGAAGTAGAC
ACTGATGAGGTACTGGACGCTATCGGTCTCGACTCCCGTATCGGTTCGGAGTTCCTCGGTGCGGGCGTCGGATGGGGTGG
CAGTTGCTTCCCGAAAGACGTCGCCGCCATCGTCGCCGCCGCCCGCGACGTGGGCTACGAACCCGCGATGCTCGATGCGG
CCGTCGAGGTGAACGACAACCAACCGGTTCGGATGCTCGACATTCTCCGTGACCACGCTGATCCAGACGGTGCCCGAATC
GCCGTCCTCGGACTCGCGTTCAAACCGGGGACTGACGACGTGCGCAACTCCCGCGCGATTCCGCTCATTGACGCGCTCCT
TGACGCAGGTGCCGACGTGGTCGGATACGACCCAGTAGCGACCGAGAACTTCCGCGATAAGTTCCCCGACCTCGACTACG
CCGACTCGGCAGAAAGCGCACTCGACGGTGCCGATGCCGCGCTCGTCGTCACCGACTGGGACGAGTTCGCCGCACTGGAC
GACGAGTTCGACGCGATGGCCGACGCCGTCGTCGTGGACGGTCGGAACATCGTCACGCGACGTGAAGGTATCGTCTACGA
GTCACTCGTCTGA

Protein sequence :
MEISIIGSGYVGTTIAACFADVGHNVVNVDIDEEIVETLNSGNSPIHEPSLDERIEEHAGDRLRATTDYDAILDTDVTFL
ALSTPSTDDGHIDLSVMEAGAKSLGATLAEKDDYHLVVTKSTVVPTTTEEVIAPILEEHSGKTVGEDFDVGMNPEFLREG
SAVDDFLDPDKVVLGSHTDRAAERLRGVFDPLLERAPDASLVETGIREAEMIKYANNAFLAAKISLVNDLANICKEYEVD
TDEVLDAIGLDSRIGSEFLGAGVGWGGSCFPKDVAAIVAAARDVGYEPAMLDAAVEVNDNQPVRMLDILRDHADPDGARI
AVLGLAFKPGTDDVRNSRAIPLIDALLDAGADVVGYDPVATENFRDKFPDLDYADSAESALDGADAALVVTDWDEFAALD
DEFDAMADAVVVDGRNIVTRREGIVYESLV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
udgA YP_003784334.1 UDP-glucose 6-dehydrogenase Not tested PiCp 7 Protein 8e-38 41
udgA YP_005686369.1 UDP-glucose 6-dehydrogenase Not tested PiCp 7 Protein 8e-38 41
udgA YP_005682185.1 UDP-glucose 6-dehydrogenase Not tested PiCp 7 Protein 8e-38 41