Gene Information

Name : LDBND_0791 (LDBND_0791)
Accession : YP_004033813.1
Strain : Lactobacillus delbrueckii ND02
Genome accession: NC_014727
Putative virulence/resistance : Resistance
Product : copper-potassium transporting ATPase b
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG2217
EC number : -
Position : 804428 - 806437 bp
Length : 2010 bp
Strand : +
Note : -

DNA sequence :
ATGCACAACATGCACAACATGCACAACATGCACAACATGGATAATATGCATGATATGGACAATATGGATATGATGGATCA
TGGAGGACACATGATGCATATGGGTGATATGAGTAAAAAGCTCAAAGTGGCTATCATTATAATGATTCCCCTTCTACTCA
TTTCACCAATCGCTGGCTTTACTATCCTTAAATTCCCCGGAAGTGAAATTTTGCAACTTATCCTTGGTACAATTATCTTC
TTTTACTCTGGGACTCCTTTTTTTAGCGGAGCAAAAGGTGAATTAAAAAGCCGTAAGCCAGCCATGATGATGCTGATTAC
AATGGGAATTACCACTGCCTATGCTTATTCTGTTTACGCCACAATCATGAGTCTTAACGGACGTATGGTCATGGACTTCT
GGCTTGAACTGTCAACTTTAATTGTCATTATGTTGATTGGTCACCTGATTGAGATGAAAGCAATCATGGGTGCTGGCGAT
GCATTGAAAGATTTAGCAAGCCTTGTTCCCAAAAAAGCTCACTTAAAAAGCGGGAAGGATGTGGAGCTTTCAGAACTAAA
AGTTGGCGATTTACTTTTAGTGAAAGAAAATGAAAAAATTCCTGCAGATGGCATTATATTAAGTGAAGCGCTCGTTGATG
AGTCAATGATTACTGGTGAAAGCCAAGCAGTCAAGAAAAAACCAAATGACCTTGTTTATGGCGGTTCCCTCAATCTAAAC
CAACCATTTGAGATGAAAGTCACAACCCTTGGAAAAGATTCATTTCTTAATCAAGTGGCCGAATTAGTCAAGAAAGCCCA
AGCTCAAAAATCTAATTTGGAAAATATGGCAGATAGAGTGGCTGGTTACCTTTTCTATGCCGCACTTATTGTCGGTATCT
TCTCATTGATTTTTTGGACAATTAGTTCTAACTTTAGTTTTGCTCTACTTCTTGCGGTTTCTGTTTTTGTAATTGCATGT
CCACACGCTTTAGGTCTTGCGGTTCCACTTGTTGTTTCTCGCCTAACCAGTATTTCTGCTAAAAATGGTTTATTAATTCA
AAACAGAACTTCTCTAGAACAAATAAATACAATTAAATATGCCTTAATGGATAAAACGGGAACATTAACTGACGGTAAGT
TTATTGTTCGTGATGTTATTGATTTTACTGGTGAAACAGACATTCTCCAAATCATGGCAGCACTTGAAGGAAGTTCCACT
CACCCGATTGCTCAATCAATCGTTGCAGCTGCTAAACCTCTTAGAAATCTAAAAGTTGAAGCGGTTGAAAACATTCCAGG
AGTTGGAATTAAAGGGAAAGTTAATCAAAACTTTTATCAAATTGTTAACTATAAATATCTTCGTGAAAATCAACTTTCTT
ATGATGAACAAAAGATTGCTCAATATTTAGATTTAGGTTTAACTGTATCTTTCCTAATAAATGAACAACAAGATGTTTTA
GGATTTATTGCCTTAGGAGATTCTCCTAAAGCAGACGCAAAAGCCTTTATTAATGGTTTATTAGCCCAAGGAATTACCCC
TGTTATGCTCACGGGTGATAATAAAGAAACTGCTCAAAAAGTTGCTAGTGCACTAAATATTCCCGAATTTAGAGCGGAAT
TAAAACCTCAAGATAAAGCAGAAATTGTGAAAGAGTACCAAAAGAAAGCCGGCGTGCTTTTCATTGGTGATGGTGTCAAT
GATTCCCCAGCTCTTGCAACTGCTACGATTGGTTTTGCGATTGGAGCAGGAACTTCGGTTGCTATCAGTACCGCTGATGT
CGTCCTAGTTAACTCCAATCCAAGTGACGTTTTGGATATGATTAATATCTCCAAACGCATGCTTAGAAAAATGAAACAAA
ACCTCTGGTTTGGAGCAGGCTATAACATTATTGCTATTCCTGTTGCAGCGGGTATTCTTTATCCATTTACAGGGATTTAT
ATTGACCCTCTCATTGCAGCAGTTCTGATGTCAATCTCAACCGTGATTGTCTCAATCAACGCGATGGGATTGAGGTATGA
TAAAAAATAG

Protein sequence :
MHNMHNMHNMHNMDNMHDMDNMDMMDHGGHMMHMGDMSKKLKVAIIIMIPLLLISPIAGFTILKFPGSEILQLILGTIIF
FYSGTPFFSGAKGELKSRKPAMMMLITMGITTAYAYSVYATIMSLNGRMVMDFWLELSTLIVIMLIGHLIEMKAIMGAGD
ALKDLASLVPKKAHLKSGKDVELSELKVGDLLLVKENEKIPADGIILSEALVDESMITGESQAVKKKPNDLVYGGSLNLN
QPFEMKVTTLGKDSFLNQVAELVKKAQAQKSNLENMADRVAGYLFYAALIVGIFSLIFWTISSNFSFALLLAVSVFVIAC
PHALGLAVPLVVSRLTSISAKNGLLIQNRTSLEQINTIKYALMDKTGTLTDGKFIVRDVIDFTGETDILQIMAALEGSST
HPIAQSIVAAAKPLRNLKVEAVENIPGVGIKGKVNQNFYQIVNYKYLRENQLSYDEQKIAQYLDLGLTVSFLINEQQDVL
GFIALGDSPKADAKAFINGLLAQGITPVMLTGDNKETAQKVASALNIPEFRAELKPQDKAEIVKEYQKKAGVLFIGDGVN
DSPALATATIGFAIGAGTSVAISTADVVLVNSNPSDVLDMINISKRMLRKMKQNLWFGAGYNIIAIPVAAGILYPFTGIY
IDPLIAAVLMSISTVIVSINAMGLRYDKK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SH0105 YP_252020.1 hypothetical protein Not tested SCCmec Protein 1e-100 48

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
LDBND_0791 YP_004033813.1 copper-potassium transporting ATPase b BAC0079 Protein 2e-119 49
LDBND_0791 YP_004033813.1 copper-potassium transporting ATPase b BAC0629 Protein 3e-108 46
LDBND_0791 YP_004033813.1 copper-potassium transporting ATPase b BAC0383 Protein 7e-110 46