Gene Information

Name : LDBND_0780 (LDBND_0780)
Accession : YP_004033802.1
Strain : Lactobacillus delbrueckii ND02
Genome accession: NC_014727
Putative virulence/resistance : Unknown
Product : transposase, is30 family
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2826
EC number : -
Position : 792759 - 793631 bp
Length : 873 bp
Strand : -
Note : -

DNA sequence :
GTGTATACCGGCAATGTGAAGCGGTATAAAGCTGTCGAAGGGCAAAGCACTTACGAACTACATAGAAGCGAATGCGGCCG
CAAGAGCTTGTTTCTTCGCAGACATAAGTTCATCGACTATGTTTCCCACTGCTTCCATAATCATGGCTGGTCTCTTGATG
CTTGCGTGGGTTATGCTTTGGCCAAGGGAATCTTCCAGAAGGATCAGGTCGTATCAACCAAAACTCTGTATAACTACGTT
GACTTGGGCCTAATGGATATCAAGAACGGTGATCTTCAAGAGAAGGTCAAGCGCAATACTAAGACTCGTCATGCCCGTGT
AAACAAGCGTATCCTGGGACGAAGCATCGATGAACGTAGTCCTAGAATCGAAAGCCGTAAGGACTTTGGCCACTGGGAAT
GCGATCTGGTTCTTGGACACAAGACTAAGGAAGACGATGTGTTGCTTACTCTGTGCGAACGAAAGACGCGTCAGTTCTTC
ATGATCAAGATTGAGGATAAGACCTCAGCTAGCGTTATGAAGGCATTTGATAAGCTTCGAGAGTACTACGGATCCAAATG
GAATCAAATCTTTAGGTCTATCACAACCGACAACGGATCTGAGTTCGCAGATCTATCCGATCTTGAACAAGTTTCCAAGA
CTCTTGTGTACTACGCTCACCCTTATACATCCTGTGATAAAGGCAGCGTAGAACGGCACAACGGGCTTATCAGACGATAT
ATTCCCAAGGGAGACCGTATGGATAAGTACAGTGTGGAAGATATTGCTAAGATCGAGGTATGGTGCAACTCTCTTCCTCG
GAAGATCTTAAACTACAAGACTCCAGAAGAGTACTTTGACACCGAACTTGACCGCATTTACCGGCGTAGATAG

Protein sequence :
MYTGNVKRYKAVEGQSTYELHRSECGRKSLFLRRHKFIDYVSHCFHNHGWSLDACVGYALAKGIFQKDQVVSTKTLYNYV
DLGLMDIKNGDLQEKVKRNTKTRHARVNKRILGRSIDERSPRIESRKDFGHWECDLVLGHKTKEDDVLLTLCERKTRQFF
MIKIEDKTSASVMKAFDKLREYYGSKWNQIFRSITTDNGSEFADLSDLEQVSKTLVYYAHPYTSCDKGSVERHNGLIRRY
IPKGDRMDKYSVEDIAKIEVWCNSLPRKILNYKTPEEYFDTELDRIYRRR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CPR_0321 YP_697650.1 IS1470, transposase Not tested Not named Protein 2e-68 55
CPR_0628 YP_697955.1 IS1470, transposase Not tested Not named Protein 8e-69 55
CPR_1078 YP_698400.1 IS1470, transposase Not tested Not named Protein 7e-69 55
CPR_0379 YP_697708.1 IS1470, transposase Not tested Not named Protein 5e-69 55
CPR_0314 YP_697643.1 IS1470, transposase Not tested Not named Protein 4e-69 55
CPR_0967 YP_698290.1 IS1470, transposase Not tested Not named Protein 4e-69 55
CPR_0383 YP_697712.1 IS1470, transposase Not tested Not named Protein 3e-69 55
CPR_1088 YP_698410.1 IS1470, transposase Not tested Not named Protein 2e-68 55
CPR_0648 YP_697974.1 IS1470, transposase Not tested Not named Protein 1e-68 54