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Name : clpC (LDBND_0328) Accession : YP_004033356.1 Strain : Lactobacillus delbrueckii ND02 Genome accession: NC_014727 Putative virulence/resistance : Virulence Product : ATP-dependent clp protease, ATP-binding subunit Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 340066 - 342525 bp Length : 2460 bp Strand : + Note : - DNA sequence : ATGCAAAATTCATACAGTAAGAGCAGCAGACAGGTCTTGGAAATTGCCCAGGAACAAGCCAAGGAGTTTCACCACCGCCT GGTCGGGACAGAGCACGTCCTTTTGGCCCTGGTAATCGAAGCTGACGGCAAAGCCGGCAAGATCCTGCGGACCATGAACG TGACGCCGACCGGAGTCAGGGAAGAAATCGAGCGCTACACGGACTACGGCTCAGCGGCCCCGACCAGCTACATGGAATTT TCTCCCCGCCTGACTTTGGCGCTGGATTATGCCAAGCGGAATTCTGAACTCCGGTCCAGCAAGGAAATCGAAACGACTGA CATTCTCCAGGCTTTGGTTTCCAGTGAGCAGATCCTGTCAGCCATGATCCTGCGCAACCTGGACGTGGACCTGGAAAACT TGAAAGACGAACTGGACGACGCCAACCAGGTGACCGGGGAAAGCGGCCAGACCAGCCGGCCAGCCGCGGCAGGCAGCAGC CAGTCGCAGACGCCGATTTTGGACCGCTTCGGGATCGACTTGAACCGGCGGGCTAAAGAAGGCAACATTGACCCGGTGAT CGGCCGCCAGCGGGAACTGGACCGGGTGATTCAGATCCTGTCCCGGCGGACCAAGAACAACCCCCTTTTGGTCGGTGAGC CTGGGGTCGGCAAGACCGCGGTCGCTGAAGCTTTGGCCAGCGCGATCGTTGCTAAAAAGGTTCCCCGGGACCTGGCTGAC AAGCGGGTGGTTTCACTGGATGTCAACAGCATGGTGGCCGGTACCCGCTACCGGGGTGAATTTGAAGAGCGGATGGACCG CTTAATCAAGGAAGTTACTGCCAGCAAGAATGTCATTCTTTTTGTCGACGAAATGCACTCTTTGGTCAAGGCCGGGGACG CGGAAGGGGCGATGAGCGCCTCCAACACCTTGAAGCCGGCATTGGCCCGCGGGGACATTCAATTGATCGGGGCCACGACT TTTGAAGAATACCGCAAGCACATGGAAAAAGACTCTGCCTTTGTCCGCCGCTTCCAGCTGGTCCGCCTGGCTGAGCCAAA TGAAGAGGAAACCCTGCAAATTTTGCATGGGATCAAGGACAAGTATGAAGACTACCACCGGGTAGCTTTGTCAGAAGAAG CCTTGCAGGCAGCAGTTGATTTGTCCAGCCACTACATTGCCGACCGCTACCAGCCGGACAAGGCCATCGACTTGATCGAT GAAGCCAGCGCGGCGGTTAAACTGGCTAATGACACTGGCGAAGACAAGGACCTGGCTGAAATCGATTTGGAAATCAGCCG GACTCTCAAGCAGAAGAACGATGAAGCGGCCAAGCAGAACTTTGCCCAAGCGGCCAAGCTGCGCAACCAGGAAATCGCCT TGCGGCAAAAGCGGAATGAGATTGCCAAGAAGCTGGCCGGCAAGGATGAGAAGCGGTCAGTCGTTGGGGCTGAAGACGTG GCCAAGGTGGTCTCCATCTGGACCGGGGTTCCGGTAACCCAGCTTAAGACCAGCGAAAATAAGCGCCTGGCCCGCCTGGA AGGGATCCTGCATGAAAGAGTCATCGGCCAAGACGATGCCGTCAAGGCCGTGGCCAATGCCATCCGCCGGTCCAGAAGCG GCTTGAAGGACGAGAACCGGCCGATCGGTTCCTTCCTCTTCCTAGGCCCAACCGGGGTCGGCAAGACTGAACTGGCTAAG GCTGTGGCTGAGGCAGTTTTTGGCTCAGAAGACAATATCATCAGAGTCGACATGTCAGAGTACATGGACCGGGAATCTTC CTCCAAGCTGATCGGGTCAGCGCCTGGCTACGTTGGCTACGAAGAAGGTGGCCAGCTCTCCAACAAAGTCCGGGAACATC CTTACTCAGTGGTTCTTTTTGACGAAGTGGAAAAGGCAAACCCTGAAATTTTCAACGTCTTGCTACGGGTCCTGGATGAA GGCTTCATGACTGATTCTCTGGGCCGGAAGGTCGACTTCAGAAACACGATTATCATCATGACTTCCAACCTTGGTTCCAG AAGCTTGGAAGCTGACAGCCACGTGGGCTTCTCAGCCAGCCAGGAAGACCAGGGCAAGCTGATCGCGGAAAAGGTAACCA GGGCCACCAAGGACTTCTTCCGGCCGGAATTTTTGAACCGGATCGACGAAAAGATCGTCTTCAAGCCTCTGGAAGCCAAG CAGCTGCGGGAAATCGTGACGCTTCTGACCCGGAAACTGGTCAAGCGGCTGGCGGAAAAAGATATTACTTTGCGCCTGTC GCCAGCTGCCTTGGACCAATTGGCCAAGGACGGCTACAATCCGGAAATGGGGGCCCGGCCATTGCGGCGGACCATCCAGG ATGAAGTTGAAGACGAATTGGCCCAGGACCTGGTCAGCGAAAAGCTGCAGGCCGGCGACACGGTCAAGATCGGTGCCCGG GGCGGCAAGCTGCGCTTTGAAATCGTCAAGGCCAAGACTGGTGAAAAGATCAAGGGATAA Protein sequence : MQNSYSKSSRQVLEIAQEQAKEFHHRLVGTEHVLLALVIEADGKAGKILRTMNVTPTGVREEIERYTDYGSAAPTSYMEF SPRLTLALDYAKRNSELRSSKEIETTDILQALVSSEQILSAMILRNLDVDLENLKDELDDANQVTGESGQTSRPAAAGSS QSQTPILDRFGIDLNRRAKEGNIDPVIGRQRELDRVIQILSRRTKNNPLLVGEPGVGKTAVAEALASAIVAKKVPRDLAD KRVVSLDVNSMVAGTRYRGEFEERMDRLIKEVTASKNVILFVDEMHSLVKAGDAEGAMSASNTLKPALARGDIQLIGATT FEEYRKHMEKDSAFVRRFQLVRLAEPNEEETLQILHGIKDKYEDYHRVALSEEALQAAVDLSSHYIADRYQPDKAIDLID EASAAVKLANDTGEDKDLAEIDLEISRTLKQKNDEAAKQNFAQAAKLRNQEIALRQKRNEIAKKLAGKDEKRSVVGAEDV AKVVSIWTGVPVTQLKTSENKRLARLEGILHERVIGQDDAVKAVANAIRRSRSGLKDENRPIGSFLFLGPTGVGKTELAK AVAEAVFGSEDNIIRVDMSEYMDRESSSKLIGSAPGYVGYEEGGQLSNKVREHPYSVVLFDEVEKANPEIFNVLLRVLDE GFMTDSLGRKVDFRNTIIIMTSNLGSRSLEADSHVGFSASQEDQGKLIAEKVTRATKDFFRPEFLNRIDEKIVFKPLEAK QLREIVTLLTRKLVKRLAEKDITLRLSPAALDQLAKDGYNPEMGARPLRRTIQDEVEDELAQDLVSEKLQAGDTVKIGAR GGKLRFEIVKAKTGEKIKG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 8e-177 | 46 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpC | YP_004033356.1 | ATP-dependent clp protease, ATP-binding subunit | VFG0079 | Protein | 0.0 | 50 |
| clpC | YP_004033356.1 | ATP-dependent clp protease, ATP-binding subunit | VFG0080 | Protein | 2e-149 | 49 |
