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Name : lysS (LDBND_0321) Accession : YP_004033349.1 Strain : Lactobacillus delbrueckii ND02 Genome accession: NC_014727 Putative virulence/resistance : Virulence Product : lysyl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG1190 EC number : - Position : 333672 - 335195 bp Length : 1524 bp Strand : + Note : - DNA sequence : TTGGCAAAGAACGAAATTAACGACCAAGTGCTTGTTCGTCGGCAAAAGCTTGAAGAACTCAAGGAGATGGGGATTGAACC CTTCGGACGCAAATATGACCGGGAAGCCTTGGCCCGCGACCTGGACGAAAAGTACTTGGGCCTTGACAAGGACGAACTGA ACGCAAATATGCCGAAGACCAAGATCGCTGGCCGGATGCTGGCCAAGCGGGGCAAGGGCAAGGTCGGCTTTGCGGACCTC TATGACCGTAGCGGCAAGATCCAGATCTACGTCCGCAAGGACATGGTCGGTGAAGAAAACTACCAGATTTTCAAGAAGGC CGACCTTGGTGACTTCCTGGGCGTTGAAGGCGAAGTCTTCAAGACTGACTCAGGCGAATTGTCTGTCCGGGCCCAGCACG TGACCTTCCTGTCCAAGGCTTTGCGGCCACTGCCTGACAAGTACCACGGTCTTAAGGACGTTGAATCCATTTATCGCCAA CGCTACCTGGACTTGATCACCAACCACGAAAGCTACCAGCGCTTCGTTAACCGGACCAAGATCATCCAGGCCATCCGTGA CTACTTGAACGGGCAGGACTTCCTGGAAGTTGAAACGCCAGTTTTGCACAACATCCCAGGCGGGGCTGAAGCACGTCCGT TCATCACCCACCACAACGCTTTGGACATCAACCTCTACATGCGGATTGCCCTGGAATTGCCGCTGAAGCGTCTGATCGTC GGTGACATGGAACGGGTTTACGAAATCGGCCGGGTCTTCAGAAATGAAGGGATGGACCTCAAGCACAACCCTGAATTTAC TGAACTGGAAACCTACGCTGCTTACTACGACTTCCACGATGTCATGGATGAAGCCGAAGGCATCATCCGGGCAGCGGCCA AGGTTGTTTCAGAAGACGGCAAGATCAACTACCAGGGCACTGACCTGGACTTGGGCAAGCCATTCCGCCGGGTGCACATG GTTGACCTGATCAAGGAACTGACTGGCGTTGACTTCTGGCAGCCAATGACTCTGGAAGAAGCCCGGAAGGTTGCCGCTGA ACACCATGTTGAAGTTGAACCTTACTGGCAAGTTGGCCACATCATCAACGCCTTCTTTGAAGAATTTGGTGAAAAGACAA TCGTTGACCCAACCTTCGTTTACGGCCACCCAGTTGAAGTTTCACCGCTGGCCAAGAAGAACGCGGATGACCCGCGCTTC ACTGACCGTTTCGAAATCTTCATCATGGGCAATGAATACGGCAACGCCTTCTCAGAACTGAACGACCCGCTTGACCAGCG GGAACGGTTCGAAGCCCAAATGGCTGAACGTGACGCCGGTAACGACGAAGCCGACATCATCGACGAAGACTACCTGCGGG CTATGGAATACGGTATGCCACCTACGGGTGGTCTGGGCATCGGGATCGACCGTCTGGTCATGCTTTTGACCAACGCGGCT TCAATCCGCGACGTCCTCCTCTTCCCAACCATGCGGCCGGAAAAGATCGTCGACGACGAAAAGAACATTGACCTGGACAA GTAG Protein sequence : MAKNEINDQVLVRRQKLEELKEMGIEPFGRKYDREALARDLDEKYLGLDKDELNANMPKTKIAGRMLAKRGKGKVGFADL YDRSGKIQIYVRKDMVGEENYQIFKKADLGDFLGVEGEVFKTDSGELSVRAQHVTFLSKALRPLPDKYHGLKDVESIYRQ RYLDLITNHESYQRFVNRTKIIQAIRDYLNGQDFLEVETPVLHNIPGGAEARPFITHHNALDINLYMRIALELPLKRLIV GDMERVYEIGRVFRNEGMDLKHNPEFTELETYAAYYDFHDVMDEAEGIIRAAAKVVSEDGKINYQGTDLDLGKPFRRVHM VDLIKELTGVDFWQPMTLEEARKVAAEHHVEVEPYWQVGHIINAFFEEFGEKTIVDPTFVYGHPVEVSPLAKKNADDPRF TDRFEIFIMGNEYGNAFSELNDPLDQRERFEAQMAERDAGNDEADIIDEDYLRAMEYGMPPTGGLGIGIDRLVMLLTNAA SIRDVLLFPTMRPEKIVDDEKNIDLDK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD66193.1 | putative lysil-tRNA synthetase LysU | Not tested | PAI III 536 | Protein | 4e-112 | 47 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| lysS | YP_004033349.1 | lysyl-tRNA synthetase | VFG1668 | Protein | 2e-112 | 47 |
