|
Name : treC (LDBND_1813) Accession : YP_004034809.1 Strain : Lactobacillus delbrueckii ND02 Genome accession: NC_014727 Putative virulence/resistance : Unknown Product : alpha,alpha-phosphotrehalase (gh13) Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG0366 EC number : - Position : 1864558 - 1866210 bp Length : 1653 bp Strand : + Note : - DNA sequence : ATGCAAAATCTAGGTCAAAAAGTCATCTACCAGATCTACCCAAAGTCCTTCTACGACGCTAACGGCGACGGGATCGGGGA CCTCCGGGGCATTATCGAGAAGATCGACTATATCAAGAAGCTGAACGTAGACATGATCTGGTTCAACCCCTTCTATGTTT CCCCGCAAAACGACAACGGCTATGATATCGCCAACTACAGGGAGATCGATCCCCTTTTTGGCACGATGGATGATTTTGAA GAGTTGCAGGCCAAATTAGCGGACATCGGCGTGGACGTGATGCTGGACATGGTTTTGAACCACTGCTCAACTGAACATGA ATGGTTCAAGAAGGCTTTAGCCGGGGATGAAAAATACCGGAAGTTCTTCTACCTGCGGCCCGGCAAGCCTGACGGCAGCC TGCCAAACAACTGGCAGTCCAAGTTCGGCGGCCCGGCCTGGTCCAAATTTGGTGACACTGACCTTTACTACCTCCACCTC TATGACCCGACCCAGGCTGATCTGGACTGGCACAATCCGGAAGTCAGAAAGGAACTGGAAGACGTGGTCAACTTCTGGCG GGGCAAGGGGGTCCGGGGCTTCCGCTTCGATGTCATCAACGTGATTGGCAAGAGCGAGGATCTGGTCGACTCCACTGACC CAACCGAAGAAAAAACTCTCTACACCGATACGCCAGTGGTTCACGACTACCTAAAGGAACTGAACCGGACGACTTTTGGC CAAGACGAGGACTCTATCACGGTTGGGGAAATGTCTTCAACGACTATCCCCAACAGCGTCCGCTACACCAACCCTAAGGA AAAGGAGCTGTCCATGGTCTTCACCTTCCACCATTTGAAGGTCGACTACAAGGACGGGGAAAAGTGGACTAAGACGCCGT TTGACTTCATGAAGCTGAAGGGCCTACTCAGCTCCTGGCAGACAGGGATGACCGAAGGCGGCGGCTGGAACGCTGTCTTC TGGAACAACCACGACCAGCCTTGGGCCTTAAACCGCTTCGGCGACCCGGTCCACTACCGAGAAAAGTCAGCGGAAATGCT GGCGGCCACGATCCACTTTTTGCGGGGAACGCCATTCATCTACCAGGGAGAAGAACTGGGGATGGTCAACCCAGACTACC AGTCAATGGACGAATACGTGGACGTGGAATGCAAGAACGCCTACCAGGAATTGCTGGACAAGGGAATGAGCGAGGATGAG GCTTTTGCAATCATCAAGGCCAAGTCCCGAGACAACTCCCGGGTGCCAATGCACTGGGATGATAGCAAGTACGCCGGCTT CAGCCAGGTTAAGCCGTGGCTTCTGCCAACCCACCAAGACGAAATCAATGTCAAAAAAGAACTGGCTGAGGGAGAAATTT TCGCCTTCTACCAGAAGCTGATTGCTTTAAGAAAACAGGAAGCAGTAATTTCTGCCGGCGGCTTCCGGGAAATCCTGCCG GATGACCAGCAAGTTTTTGCCTATGTCAGAGAGCTGGACGGGGAAAAGTTGGTTGTCTTCAACAACTTCTATGGAAAAGA AGCCGTGATCTCCGTGCCAAGCGACCTGCAGGAATGCGGCCAGATTCTTTTGGACAACTACAAAAGAGAGCTCAGCTGCC TGCCAGGTGAATTGAGCCTGCGGCCATACGAAAGTCTGGCCTTTAGAATTTAA Protein sequence : MQNLGQKVIYQIYPKSFYDANGDGIGDLRGIIEKIDYIKKLNVDMIWFNPFYVSPQNDNGYDIANYREIDPLFGTMDDFE ELQAKLADIGVDVMLDMVLNHCSTEHEWFKKALAGDEKYRKFFYLRPGKPDGSLPNNWQSKFGGPAWSKFGDTDLYYLHL YDPTQADLDWHNPEVRKELEDVVNFWRGKGVRGFRFDVINVIGKSEDLVDSTDPTEEKTLYTDTPVVHDYLKELNRTTFG QDEDSITVGEMSSTTIPNSVRYTNPKEKELSMVFTFHHLKVDYKDGEKWTKTPFDFMKLKGLLSSWQTGMTEGGGWNAVF WNNHDQPWALNRFGDPVHYREKSAEMLAATIHFLRGTPFIYQGEELGMVNPDYQSMDEYVDVECKNAYQELLDKGMSEDE AFAIIKAKSRDNSRVPMHWDDSKYAGFSQVKPWLLPTHQDEINVKKELAEGEIFAFYQKLIALRKQEAVISAGGFREILP DDQQVFAYVRELDGEKLVVFNNFYGKEAVISVPSDLQECGQILLDNYKRELSCLPGELSLRPYESLAFRI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| malL | YP_251987.1 | oligosaccharide alpha-1,6-glucosidase | Not tested | SCCmec | Protein | 6e-104 | 41 |
