Gene Information

Name : LDBND_0128 (LDBND_0128)
Accession : YP_004033159.1
Strain : Lactobacillus delbrueckii ND02
Genome accession: NC_014727
Putative virulence/resistance : Unknown
Product : transposase, is30 family
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2826
EC number : -
Position : 129083 - 130132 bp
Length : 1050 bp
Strand : +
Note : -

DNA sequence :
ATGGATCATTCATATTCTAACACTAAACCACACCAAAAGGGCAAGCACCTTAAGCTGAACGACCGAACTACAATCCAGGA
GCTGCACTCTAAGGGCTACTCTAATCGTGCTATAGCTAGAGAACTTAACTGCTCACCAAGCACGGTCGGATATGAGCTCA
AAAGAGGCACAGTATCCCTGTATACCGGCAATGTGAAGCGGTATAAAGCTGTCGAAGGGCAAAGCACTTACGAACTACAT
AGAAGCGAATGCGGCCGCAAGAGCTTGTTTCTTCGCAGACATAAGTTCATCGACTATGTTTCCCACTGCTTCCATAATCA
AGGCTGGTCTCTTGATGCTTGCGTGGGCTATGCTTTGGACAAGGGAATCTTCCAGAAGGATCAGGTCGTATCAACCAAAA
CTCTGTATAACTACGTTGACTTGGGCCTAATGGATATCAAGAACGGTGATCTTCCAGAGAAGGTCAAGCGTAATACTAAG
ACTCGTCGTGCCCGTGTAAACAAGCGTATCCTAGGACGAAGCATCGATGAACGTAGTCCTAGAATCGAAAGCCGTAAGGA
CTTTGGTCACTGGGAATGCGATCTGGTTCTTGGACACAAGACTAAGGACGATGATGTGTTGCTTACTCTGTGCGAACGAA
AGACGCGTCAGTTCTTCATGATCAAGATCGAGGATAAGACCTCAGCTAGCGTTATGAAGGCATTTGATAAGCTTCGAGAG
CACTACGGATCCAAATGGAATCAAATCTTTAAGTCTATCACAACCGACAATGGATCTGAGTTCGCAGATCTATCCGATCT
TGAGCAAGTTTCCAAGACTCTTGTGTACTACGCTCACCCTTATACATCCTGTGATAAAGGCAGCGTAGAACGGCACAATG
GGCTTATCAGACGCTATATTCCCAAGGGAGACCGTATGGATAAGTACAGTGTGGAAGATATTGCTAAGATCGAGGTATGG
TGCAACTCTCTTCCTCGGAAGATCTTAAACTACAAGACTCCAGAAGAGTACTTTGACACCGAACTTGACCGCATTTACCG
ACGTAGATAG

Protein sequence :
MDHSYSNTKPHQKGKHLKLNDRTTIQELHSKGYSNRAIARELNCSPSTVGYELKRGTVSLYTGNVKRYKAVEGQSTYELH
RSECGRKSLFLRRHKFIDYVSHCFHNQGWSLDACVGYALDKGIFQKDQVVSTKTLYNYVDLGLMDIKNGDLPEKVKRNTK
TRRARVNKRILGRSIDERSPRIESRKDFGHWECDLVLGHKTKDDDVLLTLCERKTRQFFMIKIEDKTSASVMKAFDKLRE
HYGSKWNQIFKSITTDNGSEFADLSDLEQVSKTLVYYAHPYTSCDKGSVERHNGLIRRYIPKGDRMDKYSVEDIAKIEVW
CNSLPRKILNYKTPEEYFDTELDRIYRRR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CPR_1078 YP_698400.1 IS1470, transposase Not tested Not named Protein 4e-75 51
CPR_0379 YP_697708.1 IS1470, transposase Not tested Not named Protein 4e-75 51
CPR_0314 YP_697643.1 IS1470, transposase Not tested Not named Protein 2e-75 51
CPR_0967 YP_698290.1 IS1470, transposase Not tested Not named Protein 2e-75 51
CPR_0383 YP_697712.1 IS1470, transposase Not tested Not named Protein 2e-75 51
CPR_1088 YP_698410.1 IS1470, transposase Not tested Not named Protein 2e-74 51
CPR_0321 YP_697650.1 IS1470, transposase Not tested Not named Protein 1e-74 51
CPR_0628 YP_697955.1 IS1470, transposase Not tested Not named Protein 6e-75 51
CPR_0648 YP_697974.1 IS1470, transposase Not tested Not named Protein 3e-75 50
CPR_0659 YP_697986.1 IS1470, transposase Not tested Not named Protein 8e-49 47