Gene Information

Name : LDBND_1272 (LDBND_1272)
Accession : YP_004034284.1
Strain : Lactobacillus delbrueckii ND02
Genome accession: NC_014727
Putative virulence/resistance : Resistance
Product : cystathionine beta-lyase
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0626
EC number : -
Position : 1306569 - 1307753 bp
Length : 1185 bp
Strand : +
Note : -

DNA sequence : 
ATGGAATTTGATACAAAATTAATTCATGGTGGTATTAGCGAAGATAAAGCAACCGGAGCAGTTTCGGTGCCGATTTATAT
GGCATCAACTTTTCATCAGCAAAAAATCGGTGAAAATCAATATGAGTATTCTCGTTCTGGAAACCCAACTCGAGAAGCAG
TTGAAAAACTAATTGCCGAGTTGGAAGGCGGCACAGCCGGGTTTGCATTTGCTTCCGGTTCAGCTGCAATCGACACAGTC
TTCTCAATGTTCTCCGCCGGCGACCATTTCGTCATTGGCAATGATGTCTACGGTGGTACCTTCCGATTGATTGACGCCGT
TTTAAAACGCTTTGGCATGACCTTTACCGTAGTTGACACCCGCGACCTGGCCGCTGTTGAAGAAGCGATTACGCCAAATA
CCAAAGCAATTTACTTGGAAACGCCAACCAACCCGCTTTTACGAGTAACCGATATTGCAGCGGTTGCCAAGATTGCCAAA
TCGCACCAAATTTTAAGCATTATCGACAACACTTTCTCCTCGCCTTACATTCAGCGACCGCTGGAACAGGGAGTGGATAT
TGTTCTTCACAGTGCTTCCAAGTATCTTGGTGGTCACAGCGACGTCATTGCCGGGCTGGTCGTCACTAAAGATGATCAAT
TGGCCGAAAAAATTGGTTACCTTCAAAATGCCATTGGTGGTATTTTGGCCCCTCAGGAAAGTTGGCTATTGCACCGTGGG
ATTAAAACGTTGTCTCTTCGAATGCGTGCTCATTTGGCCAATGCCGAAGCCGTCTTCAATTATCTATCAAACCAGCCACT
TGTCAGCAAAATTTACTACCCTGGCGATCCGAACAACCCTGATTACGAAGTCGCAAAAAAACAAATGCATGGCTTTGGCG
CAATGATTTCCTTTGAATTACAGGACGGACTGGATCCAAAACAATTTGTTGAACAACTGCACGTTATCACATTGGCCGAG
AGTTTGGGGGCACTGGAAAGCTTGATCGAAATTCCGGCCTTGATGACCCACGGCTCAATTCCACGTGACATTCGGTTGAA
AAACGGCATCAAAGACGAGTTAATTCGCCTTTCAGTCGGCGTTGAAGACCAAAAGGATTTGTTAGCCGATTTGGAACGCG
GCTTCAATGAGCTTAAGAGGAGCGAGAAAAATGTTTCAGACAGCAAGGTCCATTCTCAAGCGTGA

Protein sequence : 
MEFDTKLIHGGISEDKATGAVSVPIYMASTFHQQKIGENQYEYSRSGNPTREAVEKLIAELEGGTAGFAFASGSAAIDTV
FSMFSAGDHFVIGNDVYGGTFRLIDAVLKRFGMTFTVVDTRDLAAVEEAITPNTKAIYLETPTNPLLRVTDIAAVAKIAK
SHQILSIIDNTFSSPYIQRPLEQGVDIVLHSASKYLGGHSDVIAGLVVTKDDQLAEKIGYLQNAIGGILAPQESWLLHRG
IKTLSLRMRAHLANAEAVFNYLSNQPLVSKIYYPGDPNNPDYEVAKKQMHGFGAMISFELQDGLDPKQFVEQLHVITLAE
SLGALESLIEIPALMTHGSIPRDIRLKNGIKDELIRLSVGVEDQKDLLADLERGFNELKRSEKNVSDSKVHSQA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAR0460 YP_039909.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 1e-85 51
SAS0418 YP_042545.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 1e-86 51
metB YP_281510.1 cystathionine beta-lyase Not tested Not named Protein 3e-65 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
LDBND_1272 YP_004034284.1 cystathionine beta-lyase BAC0207 Protein 7e-66 43