Gene Information

Name : LDBND_1203 (LDBND_1203)
Accession : YP_004034215.1
Strain : Lactobacillus delbrueckii ND02
Genome accession: NC_014727
Putative virulence/resistance : Unknown
Product : glycosyl transferase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG0438
EC number : -
Position : 1248015 - 1249514 bp
Length : 1500 bp
Strand : -
Note : -

DNA sequence :
ATGACAGTTTATAGCATCAACAAGGGAATTGGCTGGGCCTCCAGTGGGGTTGAATATGCACAGGCCTACCGAAGCCAGGT
CTTTCGTAAGTTGGGAGTAAAGGCCAAGTTCATTTTTACTGATTGGATTGGCTATGAAAACATTGCCCACTTAACCAGGA
ATCTGGGTTTTGAAGATAAGGAAATCATTTGGCTGTATACCTTTTTCACTGACTTTGAAATCCGGGCAGGCTGCTTTACT
TTGGGCGACTTGGAAAAGGTTCTACCGCCAATTATAAAGCGTAAGCACTTAGGCAAGGCGGTTCGCTATATCTTTGCCAA
TGACTTTTGGGCTACGGCTTATTTGAAGGATTTGAAATCAAACATCGTTGACCGGGTTGAATATGTATCTGGGGTGAACC
TAGTCAGAAAGGACTATTATAGCTATGGTCGTTACTGCAGCGAGTTTTACGCTCCAGAAAACAATCGAGCCAAGCTTTAC
CAGCGCCGCTTTTACAATGAAGACGGGACAACCGCTTATGATGAAATCATCGATGGTGACCAGGAAGTCTTCAAGTTCAA
AGATGAAATTCTGTACTCTAAGCATGAGCTTTTAATCAAGATGCTGCAGGAACTTAATTTTTCCAAAGCAGACATCATCT
TGATCGACCGGGCTGGAGACCAGGGCCAGGAAATTCTAGAAAACCGTGGTAAGGCCCAGGTGGGGACGGTCATTCACGCT
GAGCACTTCAGTGAAGCTGAGACTAATGACACTACCATTCTTTGGAATAATTACTATGAGTATATGCTTGAGCATGATGA
CCAGATTGACTTTTATGTGACGGCAACTGACTGGCAGAAAAAGTTGATGGAAGAACAGTTCTTAAAGTATAAGGGTAAGA
AGCCCCAGATTTATGTAATTCCAGTGGGCAGCTTAAAAGAATTGAAGAAACCAGATTTTGCCTCACGCAACCCTTTCAGT
CTGGTGACGGCCTCACGCTTAGCCAGCGAGAAGCATTTGGACTGGGCAATTCGCGCTGTGGCTAAAGCTAAGAAATCCTT
GCCGCAACTTAGTTTGGACATTTACGGAGAAGGTTCCGAACGAGCCATACTGGAAGATGTGATTAAGGAAGTTGGAGCTG
TGGACTATGTTCACTTAAAGGGCCACCAGCAGATGGACAATATCTACCAGCACTACCAAGCCTATTTGTCCTGCTCGACC
AGTGAAGGCTTTGGTCTCACCTTGATGGAAGCAGTGGGATCTGGCCTAGCTATGGTCGGGTTTGATGTCCGCTATGGAAA
CCAAACCTTTATCGCTGACAATGGCCTTCTTTTGCCATATGATCGATTAGCAACCGTGTCAGATTATGTCAACGAAATGT
CCCAGGCGATTGTCAAACTTTTCTCATCAGACTTAGCTGCTATGTCAGAGAAGTCTTATGCAATAGCTGACAAGTATAAT
GAGAAGCAGGTTGCCAAGCTATGGAAAAAGGTTATAGAAAGTGAGCTGCACCGTGATTAA

Protein sequence :
MTVYSINKGIGWASSGVEYAQAYRSQVFRKLGVKAKFIFTDWIGYENIAHLTRNLGFEDKEIIWLYTFFTDFEIRAGCFT
LGDLEKVLPPIIKRKHLGKAVRYIFANDFWATAYLKDLKSNIVDRVEYVSGVNLVRKDYYSYGRYCSEFYAPENNRAKLY
QRRFYNEDGTTAYDEIIDGDQEVFKFKDEILYSKHELLIKMLQELNFSKADIILIDRAGDQGQEILENRGKAQVGTVIHA
EHFSEAETNDTTILWNNYYEYMLEHDDQIDFYVTATDWQKKLMEEQFLKYKGKKPQIYVIPVGSLKELKKPDFASRNPFS
LVTASRLASEKHLDWAIRAVAKAKKSLPQLSLDIYGEGSERAILEDVIKEVGAVDYVHLKGHQQMDNIYQHYQAYLSCST
SEGFGLTLMEAVGSGLAMVGFDVRYGNQTFIADNGLLLPYDRLATVSDYVNEMSQAIVKLFSSDLAAMSEKSYAIADKYN
EKQVAKLWKKVIESELHRD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
gtf1 YP_006310686.1 glycosyltransferase Not tested FWisland_3 Protein 2e-110 50
SH0041 YP_251956.1 hypothetical protein Not tested SCCmec Protein 1e-103 48