Gene Information

Name : LDBND_1020 (LDBND_1020)
Accession : YP_004034036.1
Strain : Lactobacillus delbrueckii ND02
Genome accession: NC_014727
Putative virulence/resistance : Resistance
Product : ABC antimicrobial peptide transporter ATPase
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 1052030 - 1052782 bp
Length : 753 bp
Strand : +
Note : -

DNA sequence :

ATGGAAAAAGTGATGACTGTCAACAACGTTACAAAGACTTACGGTAAAAAAGGGGAGAAGCAGTTCCAGGCCTTAAAGGG
CGTCTCGCTCAGCATAGCCAAGGGCGAATTCGTCGCCATTATGGGGACTTCCGGTTCTGGTAAGACCACTCTTTTGAACA
TCATGTCGACCTTGGACAAGCCAAGCAGCGGCGAGGTTACGGTTAACGGCAAAAACATCGCCAAGCTGAAGAAGAACCAG
ATGGCCGCCTTCCGGGCTAAAGAAATTGGCTTTATCTTCCAGGACTTCAACCTCTTGGACAACCTGACCGCTAGGGAAAA
CATTGCCCTGCCACTTTCTTTGCAAGGGGTAAAAAGCTCAGAAATCGATTCTAAGGTCGATAAGATCGCAGCTAAGCTCA
ACATCAGCGAAGTCTTGGAAAAGTACCCAGCAGCCATTTCCGGCGGGCAGAAGCAAAGAGTTGCTGCTGCCAGAGCCTTG
GTTCATGAACCGGCAATCTTGATGGCCGATGAACCAACCGGGGCCCTGGATTCTAAGTCTTCCAGGGCCTTGCTGGACAC
GATGGAGCTGCTTAATGAGAAAGACCGGGTTTCAATCTTGATGGTCACTCACGATCCGCTTTCTGCATCATTTGCTGACC
GGATTCTCTTTATCAGGGACGGCTTGATTGATGAAGAGATCAAGCGCGGGGACTTGAAGCGGCAGGACTTTTGCAAGAAG
CTGATCAGCCAGCTCAGCGAAAATACCGACTAG

Protein sequence :

MEKVMTVNNVTKTYGKKGEKQFQALKGVSLSIAKGEFVAIMGTSGSGKTTLLNIMSTLDKPSSGEVTVNGKNIAKLKKNQ
MAAFRAKEIGFIFQDFNLLDNLTARENIALPLSLQGVKSSEIDSKVDKIAAKLNISEVLEKYPAAISGGQKQRVAAARAL
VHEPAILMADEPTGALDSKSSRALLDTMELLNEKDRVSILMVTHDPLSASFADRILFIRDGLIDEEIKRGDLKRQDFCKK
LISQLSENTD

• Homologs from PAI DB

Gene	GenBank Accn	Product	Virulance or Resistance	PAI or REI	Alignment Type	E-val	Identity
Cp1002_1464	YP_005681730.1	ABC transporter ATP-binding protein	Not tested	PiCp 5	Protein	4e-34	44
CpC231_1466	YP_005683828.1	ABC transporter ATP-binding protein	Not tested	PiCp 5	Protein	7e-36	43
cpfrc_01473	YP_003783873.1	hypothetical protein	Not tested	PiCp 5	Protein	7e-36	43
CpI19_1473	YP_005685914.1	ABC transporter ATP-binding protein	Not tested	PiCp 5	Protein	7e-36	43

• Homologs from CARD and BacMet (resistance genes)

Gene	GenBank Accn	Product	ID of source DB	Alignment Type	E-val	Identity
LDBND_1020	YP_004034036.1	ABC antimicrobial peptide transporter ATPase	CP001581.1.gene598.p	Protein	6e-41	46
LDBND_1020	YP_004034036.1	ABC antimicrobial peptide transporter ATPase	NC_012469.1.7686878.	Protein	1e-44	45
LDBND_1020	YP_004034036.1	ABC antimicrobial peptide transporter ATPase	CP001581.1.gene798.p	Protein	3e-38	43
LDBND_1020	YP_004034036.1	ABC antimicrobial peptide transporter ATPase	NC_008702.1.4606598.	Protein	2e-36	42