Gene Information

Name : LA2_01510 (LA2_01510)
Accession : YP_004031090.1
Strain : Lactobacillus amylovorus GRL 1112
Genome accession: NC_014724
Putative virulence/resistance : Virulence
Product : ATPase
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG0542
EC number : -
Position : 304392 - 306890 bp
Length : 2499 bp
Strand : +
Note : COG0542 ATPases with chaperone activity, ATP-binding subunit

DNA sequence :
ATGGAAAACTCATATAGTAAAAGCGTTAATCAAGTATTGGAAATTGCACGTGAACAAGCACAGAATTTCCATCATCGCTT
AATCGGAACAGAACACGTTTTATTGGCTTTAGTAATTGAAACAGACGGTGAAGCAGGGAAGATACTTCGTTCATGGGGCT
TAACTCCTACTGCTGTGCGTGAAGAAATTGAGCGCTACACCGGTTACGGTTCAGCACCTAAAGCTAGTTATATGGAAATG
TCACCTCGTTTGAGCTTGGCACTAGACTACGCTAAGAGACAAGCGGATCAAGGTGGATACAAGGAAATTCAAACTAACCA
TGTTTTGCTAGGAATAACTGCTAGTGAACAAGTCTTATCAGCAATAATTTTAAAGAATTTGAATGTTGATATTGGTCGTT
TGCGTCAAGATGCAATTGATAGTTTGGCACAAGACCAAGATTTTGCGGATTCAGCTAACTGGTTAGGCAACAATAATACA
TCCTCAGCACCAGCACAAAAGAAACGTAAGGCAAGTACAACACCTACCTTGGATAAGATTGCAATTAACTTGAATCAACG
TTCACGCGAAGGAGCTATCGATCCAGTTATCGGTCGTTCTAAAGAAATTGAACGTGTAATTCAAATTCTTTCTCGTCGTA
CTAAGAACAACCCAGTTTTGGTTGGTGAACCAGGTGTTGGTAAGACTGCCGTAGCTGAAGCAATTGCCACAGAAATCGTT
AAGAAAAAGGTGCCAGAAGATTTACTTGATAAGCGTGTCATGGCACTGAATATGGGTAACTTGGTTGCCGGCACTAAGTA
CCGTGGTGAATTCGAAGATCGAATGAAGAAGATCTTGGATGAAATCGCAAAAGACGGCAAGGTCATCTTGTTTGTTGATG
AAATGCATACCTTGATTGGTGCTGGTGGTGCCGAAGGTGCAATCGATGCTTCTAATATTTTGAAGCCATCACTTGCTCGT
GGTGATATCCAAATGATTGGTGCAACTACTTTTGATGAATATCAAAAGTACATTGAAAAAGATCAAGCTTTGGCTCGTCG
TTTCCAACAAGTTCGTCTTAACGAACCTTCAAGAAAAGAAGCATTGGCTATTTTACAAGGCTTAAAGCCAAAATATGAAA
AGTTCCACCACGTAGCTATTCCTGAAGCTAGCCTTGAAGACGCTGTTGATTTATCAAGTCGTTACATTTCTGACAGATTT
TTACCAGACAAGGCGATTGACTTAGTCGATGAAGCTAGTGCAGCAGTAAAGATCCGCAATAATGTCGGCTCTAATGACAA
ATTAGTGCAAATCAACGATAAGATTAAGAATTTGATCGATCAAAAGAATGAAGCTGCTGCAAGTCAAAATTTTGTTAAGG
CTGCTCAATTGCAAGATGAACAAAATAACTTGCAAGCACAACGTGAAAAGTTGATCGATACTTTGCATTCTAAGGTAAGT
GCAAGTGCAATCGTTGAGCCTGAAGACATCGCTAAGGTTGTTTCAGATTGGACTGGTGTGCCAGTTACCCAAATGAAGCG
TAACGAAACACGTCAATTGGCTAACCTGGAGAGCCTCTTGCACAAGCGTGTTATCGGCCAAGACAAGGCTGTTTCTGCAG
TTGCTCGCGCTATTCGTCGTAGTAGAAGTGGAATTAAGGATGAACATCGTCCAATTGGTTCATTCTTATTCTTAGGACCA
ACAGGTGTAGGTAAAACTGAACTTGCTAAGTCAGTTGCTGCAGCAATGTTTGATTCAGAAGACAACATGATCAGACTCGA
TATGTCTGAATATATGGATCAAATTGCTTCAAGCAAGTTGATTGGTTCGGCTCCTGGCTACGTTGGCTATGAAGAAGGTG
GTCAACTTTCAGAACAAGTTCGTCGTCACCCATACTCAGTAGTTTTGCTTGATGAAGTAGAAAAAGCCCACCCAGATGTA
TTTAACTTGCTTTTACAAGTCCTTGATGAAGGATTTTTGACCGATTCTAAGGGTAGAAAAGTCGACTTTAGAAATACTAT
TATCATCATGACCTCTAACTTAGGTTCACGTTCATTGTTTGATCAAAACGCAGTTGGCTTTAATGCTGACAATGCTGACA
ATGCAGATCAAGCTAAGGAAAGACAAAGCAAGGTTGAACAAGCAATCAAGCAATTCTTCCGTCCAGAATTTTTGAACAGA
ATTGATGAAACAATTGTCTTCGATGAATTGGATAAGAAGCAATTGCGTAGCATTGTTACTTTGCTTACTCACAAATTGGT
TGAACGTTTGCAAAAGAAGGGTATTACGCTTAAGCTTTCTCGTGCTGCTTTGGACAAGATTGTTCAAGATGGTTATGATC
CAGAAAACGGAGCACGTCCTCTTAAAAGAGCAATTCAAAATGATATTGAAGATAAAGTGGCTGAAATGTTGATAACTGGT
GAAGTTCAAAAAGGTGATACTTTGAAGATTGGCAGTCAACATGGCAAGTTAAAATTTGAAATTGCTAAAGCTACCAAAAA
ATTGGAAAAAGTCAAGTAG

Protein sequence :
MENSYSKSVNQVLEIAREQAQNFHHRLIGTEHVLLALVIETDGEAGKILRSWGLTPTAVREEIERYTGYGSAPKASYMEM
SPRLSLALDYAKRQADQGGYKEIQTNHVLLGITASEQVLSAIILKNLNVDIGRLRQDAIDSLAQDQDFADSANWLGNNNT
SSAPAQKKRKASTTPTLDKIAINLNQRSREGAIDPVIGRSKEIERVIQILSRRTKNNPVLVGEPGVGKTAVAEAIATEIV
KKKVPEDLLDKRVMALNMGNLVAGTKYRGEFEDRMKKILDEIAKDGKVILFVDEMHTLIGAGGAEGAIDASNILKPSLAR
GDIQMIGATTFDEYQKYIEKDQALARRFQQVRLNEPSRKEALAILQGLKPKYEKFHHVAIPEASLEDAVDLSSRYISDRF
LPDKAIDLVDEASAAVKIRNNVGSNDKLVQINDKIKNLIDQKNEAAASQNFVKAAQLQDEQNNLQAQREKLIDTLHSKVS
ASAIVEPEDIAKVVSDWTGVPVTQMKRNETRQLANLESLLHKRVIGQDKAVSAVARAIRRSRSGIKDEHRPIGSFLFLGP
TGVGKTELAKSVAAAMFDSEDNMIRLDMSEYMDQIASSKLIGSAPGYVGYEEGGQLSEQVRRHPYSVVLLDEVEKAHPDV
FNLLLQVLDEGFLTDSKGRKVDFRNTIIIMTSNLGSRSLFDQNAVGFNADNADNADQAKERQSKVEQAIKQFFRPEFLNR
IDETIVFDELDKKQLRSIVTLLTHKLVERLQKKGITLKLSRAALDKIVQDGYDPENGARPLKRAIQNDIEDKVAEMLITG
EVQKGDTLKIGSQHGKLKFEIAKATKKLEKVK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
clpC YP_005163377.1 ATP-dependent Clp protease ATP-binding subunit Not tested Not named Protein 1e-169 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
LA2_01510 YP_004031090.1 ATPase VFG0079 Protein 0.0 52
LA2_01510 YP_004031090.1 ATPase VFG0080 Protein 1e-145 49