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Name : lysS (LA2_01495) Accession : YP_004031087.1 Strain : Lactobacillus amylovorus GRL 1112 Genome accession: NC_014724 Putative virulence/resistance : Virulence Product : lysyl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG1190 EC number : 6.1.1.6 Position : 301285 - 302835 bp Length : 1551 bp Strand : + Note : COG1190 Lysyl-tRNA synthetase (class II) DNA sequence : TTGGCAAAGAATGAAATGAACGACCAATTAAGAGTTCGTCGCCAAAAGATGGACGAAATGCGCGAAAATGGAATTGAACC ATTTGGCCAAAGAAAATTTGATCGTCAAGATTTAGCAAGTACTTTAGAAGAAAAGTATGGCAAAGAAGATAAAGATGAAT TAAACGATGACATGCCTAAGACCAAAATTGCTGGTCGTATGCTTGCTAAGCGTGGTAAGGGTAAGGTGGGTTTCGCTGAC CTTTACGACCGTACTGGCAAGATTCAAATTTACGTACGTAAAGACATCGTTGGTGAAGACAACTACAAGATCTTCAAGAA ATCAGATATCGGTGACTTCTTAGGTATCGATGGTGAAGTTATGAAAACCGATACTGGCGAGCTTACTATTAGAGCTCTTC ACGTAACATTCTTGTCCAAGGCTCTTCGTCCTTTACCAGACAAGTACCACGGCTTGAAGGATGTTGAAGCAATTTACCGT CAACGTTACCTTGATTTGATCACTAACCGTGACAGCTACATGCGCTTTGTTCACCGTACTCAAATCATTCAAGCTATTCG TGACTACTTAAATGGTCAAAACTTCTTGGAGGTTGAAACTCCAGTACTTCACAACATTCCTGGTGGTGCTGAAGCTCGTC CATTCATTACTCACCACAACGCTTTGGATATTAACCTTTACATGAGAATTGCTTTGGAACTTCCACTTAAGCGTTTGATT GTTGGTGATATGGAACGTGTTTACGAAATCGGCCGTGTATTCAGAAACGAAGGTTTGGACACTCACCACAACCCAGAATT TACTGAACTTGAAAGTTACGCAGCATACTGGGACTACCACGATGTTATGGATGAAGCTGAAGGTATTATCCGTGCTGCAG CTAAGGTTGTTTCAGATGACGGTAAGATCACTTACCAAGGTACTGACATTGACTTAGGCAAGCCATTCCGTCGCGTTCAC ATGGTTGACTTGATCAAGGAAAAGACTGGCGTTGACTTCTGGAAGCCAATGACTCTTGAAGAAGCAACTAAGATTGCGGA AGACCACGACATCCACGTTGAAAAGTTCTGGAAAGTTGGTCACATTATTAACGCCTTCTTTGAAAAGTACTGTGAAGAAA CTATTGTTGACCCAACCTTCGTTTACGGTCACCCAGTAGAAATCTCACCACTTGCTAAGAAGAATGCTGACGATCCAAGA TTTACTGATCGTTTCGAAATTTACATCATGGGTGAAGAATACGGTAACGCCTTCTCAGAATTGAACGATCCTGACGACCA ACGTGAACGTTTCGAAGCTCAAATGGAAGAACGTGAAGCAGGTAACGACGAAGCTGACATGATCGATGAAGATTACCTTC GTGCTATGGAATACGGTATGCCACCTACAGGTGGTTTGGGTATCGGTATTGACCGTTTGGTAATGCTTTTGACTGATGCT CCAGCTATTCGTGACGTTCTTTTGTTCCCAACAATGCGTCCAGAACGTGTTGAAAGCGTAGAAGCTGAAGTTAAGGCTGA TATGGAAAAGAAGAATAAAGAAAACAAGTAA Protein sequence : MAKNEMNDQLRVRRQKMDEMRENGIEPFGQRKFDRQDLASTLEEKYGKEDKDELNDDMPKTKIAGRMLAKRGKGKVGFAD LYDRTGKIQIYVRKDIVGEDNYKIFKKSDIGDFLGIDGEVMKTDTGELTIRALHVTFLSKALRPLPDKYHGLKDVEAIYR QRYLDLITNRDSYMRFVHRTQIIQAIRDYLNGQNFLEVETPVLHNIPGGAEARPFITHHNALDINLYMRIALELPLKRLI VGDMERVYEIGRVFRNEGLDTHHNPEFTELESYAAYWDYHDVMDEAEGIIRAAAKVVSDDGKITYQGTDIDLGKPFRRVH MVDLIKEKTGVDFWKPMTLEEATKIAEDHDIHVEKFWKVGHIINAFFEKYCEETIVDPTFVYGHPVEISPLAKKNADDPR FTDRFEIYIMGEEYGNAFSELNDPDDQRERFEAQMEEREAGNDEADMIDEDYLRAMEYGMPPTGGLGIGIDRLVMLLTDA PAIRDVLLFPTMRPERVESVEAEVKADMEKKNKENK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD66193.1 | putative lysil-tRNA synthetase LysU | Not tested | PAI III 536 | Protein | 2e-109 | 46 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| lysS | YP_004031087.1 | lysyl-tRNA synthetase | VFG1668 | Protein | 1e-109 | 46 |
