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Name : LA2_00870 (LA2_00870) Accession : YP_004030966.1 Strain : Lactobacillus amylovorus GRL 1112 Genome accession: NC_014724 Putative virulence/resistance : Unknown Product : transposase Function : - COG functional category : L : Replication, recombination and repair COG ID : COG3666 EC number : - Position : 170831 - 172459 bp Length : 1629 bp Strand : - Note : COG3666 transposase and inactivated derivatives DNA sequence : ATGCTAGAAGAGAATCTGCCCATGATGATTTTGGCTGACAATAGAAAGATTTCTTATCACACGATCAATAATTTCAGATC AAGCGACCATGCCAATAAGGTAATTAAGCAGTGCTTTGTCTACTTTACTTCATTATTAGAAGATGAGGGATTAATCCGTG AAAATGCAGTTTTTATCGATGGTACTAAGATTGAAGCGGACGCCAACAGGTACACTTTTGTCTGGCGAAAAGCTATTGAG AAGTATCATGCCAAGTTAAAGGAAGACGTGTCTGCTTTATATGAAGAACTGATCAATAAAGAAGTAGTCAAAGCCATGGC CGAAGAAGAAGCCCAAACTAGTCAAGGCTTAGAGATTCTGGCTCAAGAAACGGAAAAAGAAGTTGAGAAGCTGACCGATA AAATTGATCGAGAACCTAAAGCCATTCCAGGCGGATCAAAAAATAAGGCCAAGCGCCGTGAATTAAAGAAGATCGCACAT AAACTCAGAAAAGATTTTATTCCGCGTGCTAAAAAGTACGAAGAAGCTGAAGAGATCTTTGCTGGCCGTAACAGCTACTC TAAAACAGATCATGATGCCACCTTCATGCATATGAAAGAAGATCATATGAAAAACGGGCAGCTAAAGCCAGGCTACAATA TTCAGGCAGCGACTACTAATCAATATATAGTTGATTTTGCCCTGTTTCCTAATCCGACTGACTTTAGAACATTCGAACCA TTTCTAGACCAAATGAAGTCCAGAGGAATTCTCGATAAGTTTCAAAATATTGTGGCCGATGCGGGCTATGGCAGTGAATA CAATTACTCGATTCTGGAAGAGAATTATTCAGATAAGAACTATCAGATTCCGTATACCCAATACGAAAAAGAACAAACGC GAAAATATAAGAAAGATCCATCAAAGGTCGACAACTGGTACTATAACGAAGAAGAAGACTATTACGTAGATAAATCAGGC GTCCGCTTCAACTTCAAATATTATAGTCAAAGAAAAGATCGATCTACTGGCATGGTCAGAAACTTCAAAATTTATGAAGC TGATGAGTTCCAGCTAACTGAAGAACTGACCCAATTGGCTAAAACCAAAACAGGTCGACAAAGACAGATTCACTACAATC CTAACTGGCAGTATTTAAAAGAAAAAGCAAAAGAGACTCTTCAAAGCGAAGAAGGCAAACGCATCTATGGCTGTCGCAAG TCAGATGTGGAGCCAATTTTCGGGCACATGAAGAGTGTATTTGGTATGCGCAGAACGCATTTAAGAGGCAAAAAGAAAGT CGAAACGGATGTTGGCATCATGTTCATGACGATGAATTTGAAAAAATATGGAGCCAAGAAGAAGGTAAAGCCTTCGAATT TTCATTTCAAAAACAAAAAACACAGGAATTCACTAAAAATAATGAATTCCTGTGTTTTTATATCCGGGCTAAAAATCGAG TTTCTTCCCAGACACTTCTTAAATATTCAATTACTTATTTTTCTTGAAGTATTGACCCTTGTTTACTTCGTAGTACTTCT TGTAACGAGCGTAGTAGTTGTGGAACATGTACTTCATCAAAAGCCAACGCTTAAAGTTGCGGTCTTTGTCGTAAAAGACA GTAGTACCATAACGACCTTCGTGAATTAA Protein sequence : MLEENLPMMILADNRKISYHTINNFRSSDHANKVIKQCFVYFTSLLEDEGLIRENAVFIDGTKIEADANRYTFVWRKAIE KYHAKLKEDVSALYEELINKEVVKAMAEEEAQTSQGLEILAQETEKEVEKLTDKIDREPKAIPGGSKNKAKRRELKKIAH KLRKDFIPRAKKYEEAEEIFAGRNSYSKTDHDATFMHMKEDHMKNGQLKPGYNIQAATTNQYIVDFALFPNPTDFRTFEP FLDQMKSRGILDKFQNIVADAGYGSEYNYSILEENYSDKNYQIPYTQYEKEQTRKYKKDPSKVDNWYYNEEEDYYVDKSG VRFNFKYYSQRKDRSTGMVRNFKIYEADEFQLTEELTQLAKTKTGRQRQIHYNPNWQYLKEKAKETLQSEEGKRIYGCRK SDVEPIFGHMKSVFGMRRTHLRGKKKVETDVGIMFMTMNLKKYGAKKKVKPSNFHFKNKKHRNSLKIMNSCVFISGLKIE FLPRHFLNIQLLIFLEVLTLVYFVVLLVTSVVVVEHVLHQKPTLKVAVFVVKDSSTITTFVN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SAUSA300_0034 | YP_492755.1 | IS1272, transposase | Not tested | Type-IV SCCmec | Protein | 7e-63 | 41 |
| SACOL0036 | YP_184947.1 | IS1272 transposase | Not tested | Type-I SCCmec | Protein | 6e-63 | 41 |
| SAMSHR1132_00350 | YP_005324559.1 | putative transposase | Not tested | Type-IIIinv SCCmec | Protein | 6e-63 | 41 |
| MW0034 | NP_644849.1 | hypothetical protein | Not tested | Type-IV SCCmec | Protein | 6e-63 | 41 |
| unnamed | BAA86649.1 | hypothetical protein | Not tested | Type-I SCCmec | Protein | 5e-63 | 41 |
