Gene Information

Name : LA2_06130 (LA2_06130)
Accession : YP_004031974.1
Strain : Lactobacillus amylovorus GRL 1112
Genome accession: NC_014724
Putative virulence/resistance : Virulence
Product : choloylglycine hydrolase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG3049
EC number : -
Position : 1172111 - 1173088 bp
Length : 978 bp
Strand : +
Note : COG3049 Penicillin V acylase and related amidases

DNA sequence :
ATGTGTACATCAATTTGTTATAGTCCAAGTGATCACTATTTTGGTAGAAATCTTGATTATGAAATTGCTTATGGTCAAAA
GGTAGTTATCGTACCAAGAAACTATGAATTTGAATACAGAGAATTGCCAACGCAAAAGTCTCACTACGCTTTTATCGGTG
TTTCCGTGGTTAATGATGATTATCCACTTTTATGTGATGCTATTAATGAAAAGGGGCTGGGTATTGCTGGTTTAAACTTC
CAAGGTCCTAATCACTACTTCCCAAAGATGGAAGGTAAGAAGAATATTACTTCTTTTGAATTAACGCCATATTTGTTAAG
CAACTGCGAAACTACCGATGATGTTAAGGAAATCTTAGCTGATGCAAGTATTTTAAACGTTAGCTTTTCAGATAATTTAC
CTGTAGCTGACTTGCACTGGATTTTAAGTGATAAATCTGGCAAGAGCATCGTAGTTGAATCCACTAAGTCAGGTTTGCAC
GTTTACGACAATCCAGTTCATGTTTTAACTAACAATCCTGAATTTCTAGATCAATTGATCAAGTTGAGTGACTATGCCGA
TGTTACTCCACATAATCCTAAGAACACTTTAGTTCCTAATGTCGATCTCAACTTGTACAGTAGAGGTCTTGGTACTCACC
ATTTGCCTGGTGGTATGGATTCAAGTTCTCGTTTTGTTAAAGTCGCTTTCGTTTTGTCACATGCTCCTAAGGGGAAGGAT
GAAGCAGAAAACGTAACTAACTACTTCCACATTTTGCATTCTGTTGAACAACCTAAAGGCTTGGATGAAGTAGAAGACAA
TCGCTATGAATACACTATGTATTCTGATTGTATGAACTTGGATAAAGGCATTTTGTACTTCACTACTTATGACAATAACC
GGATCAATGCAGTAGATATGCATAAGGCAGATTTGGATTCAAAGGACTTGATTTGCTACGACTTGTTCAAGAAACAAGAT
ATTGAATATATGAATTAG

Protein sequence :
MCTSICYSPSDHYFGRNLDYEIAYGQKVVIVPRNYEFEYRELPTQKSHYAFIGVSVVNDDYPLLCDAINEKGLGIAGLNF
QGPNHYFPKMEGKKNITSFELTPYLLSNCETTDDVKEILADASILNVSFSDNLPVADLHWILSDKSGKSIVVESTKSGLH
VYDNPVHVLTNNPEFLDQLIKLSDYADVTPHNPKNTLVPNVDLNLYSRGLGTHHLPGGMDSSSRFVKVAFVLSHAPKGKD
EAENVTNYFHILHSVEQPKGLDEVEDNRYEYTMYSDCMNLDKGILYFTTYDNNRINAVDMHKADLDSKDLICYDLFKKQD
IEYMN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
EF0521 NP_814299.1 choloylglycine hydrolase Not tested Not named Protein 9e-80 52
ef0040 AAM75246.1 EF0040 Not tested Not named Protein 7e-80 52

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
LA2_06130 YP_004031974.1 choloylglycine hydrolase VFG2162 Protein 1e-79 49