Gene Information

Name : LA2_05000 (LA2_05000)
Accession : YP_004031758.1
Strain : Lactobacillus amylovorus GRL 1112
Genome accession: NC_014724
Putative virulence/resistance : Unknown
Product : tyrosine recombinase XerD
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG4974
EC number : -
Position : 999674 - 1000579 bp
Length : 906 bp
Strand : +
Note : COG4974 Site-specific recombinase XerD

DNA sequence :
ATGACGAATAATGAGTTGCAGGATCAAATAGACGATTACTTACGCTTTAGCCAAGTTGAGCGAGGCTTGAGCACCAATAC
AATTAGTGCTTATCGACAAGACCTCGAAGAATATCTTTCTTTTATCAAAAAAGAGGGGATGTCTTCATGGCCAACAGAAG
CTAGTGATGTTGATGCCTTTTTAGCTAGACAGCGTGATTTGAATAAGGCAACGAGTTCGATTAGTCGACTTATTTCGAGC
ATGCGTAAATTTTATCAATGGCTAGCAAGACAAAATATTCAAAAGTTAAATCCAATGCTGGAAATTGATTTACCCAAAAA
GGAGCGACGTCTGCCAACTGCTTTGAGTCGAGAAGAAGTTAATCGTTTGTTAGAACAACCAGATGTAGAACAAAAATTGG
GTCTGCGGGATCGTGCGATTTTGGAAACTTTGTATGCGACAGGAATGCGGGTTAGCGAATTGATTAATTTAGAATTACAA
GATATCCATGAAGATCTTGGCTTAATTCGTGTTTTAGGAAAGGGATCAAAGGAAAGACTGATCCCAATTAGTCCTGTAGC
TTTGCACTGGATTGATAAGTATCAAAAGCAAGTTCGCGATCCACTAATTCTTAAATCTGGGAAAAATGATGAACATCTTT
TCTTGAATAATCGTGGAGGAAAATTAACTAGGCAAGCTATTTGGCAAATGATAAAGAAATATTGTCAAATGGCAGGTATC
ACTAAAGATGTTACGCCTCACACTTTGCGTCATACGTTTGCGACGCATTTATTAGAAAATGGTGCAGATTTGAGAGTTGT
GCAAGAGATTCTAGGTCACTCTGATATTAGTACCACTCAAATCTATACTAATTTGTCGCAAAAACATATTTTACAAGTGT
ATCAAAAGACTCATCCACGTCTTTAG

Protein sequence :
MTNNELQDQIDDYLRFSQVERGLSTNTISAYRQDLEEYLSFIKKEGMSSWPTEASDVDAFLARQRDLNKATSSISRLISS
MRKFYQWLARQNIQKLNPMLEIDLPKKERRLPTALSREEVNRLLEQPDVEQKLGLRDRAILETLYATGMRVSELINLELQ
DIHEDLGLIRVLGKGSKERLIPISPVALHWIDKYQKQVRDPLILKSGKNDEHLFLNNRGGKLTRQAIWQMIKKYCQMAGI
TKDVTPHTLRHTFATHLLENGADLRVVQEILGHSDISTTQIYTNLSQKHILQVYQKTHPRL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00307 YP_008207772.1 Site-specific recombinase XerD Not tested AbaR25 Protein 8e-55 44
BJAB0868_00311 YP_008211637.1 Site-specific recombinase XerD Not tested AbaR26 Protein 8e-55 44