Gene Information

Name : RBRH_04297 (RBRH_04297)
Accession : YP_004030651.1
Strain :
Genome accession: NC_014723
Putative virulence/resistance : Unknown
Product : transposase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG1484
EC number : -
Position : 85599 - 86348 bp
Length : 750 bp
Strand : +
Note : Transposase; COG: DNA replication protein; Pfam: IstB-like ATP binding protein::PF01695
IstB-like ATP binding N-terminal::PF08483

DNA sequence :
ATGTTGATGCAGCAAACCTTAACCCAGCTTAAATCCCTAAAGCTCGACGGCATGGCTCGCGCGTTTGAGGAACAGGCGGC
GTTGACCGCCAGCGCCAGCCTGTCGTTCGAAGAGCGCTTCGGCATAGTCGTCGAACGCGAACTCGCCTGGCGCGATACAC
GGCGGCTCGAACGGCTGCTGAAGTCTGCCAAACTCAAGAATCCCCAAGCCTGCATCGAGGACATCGAGTACCGGCAGAGC
CGCGGTATCGACAAGAGCGTCGTTGCTGCACTCGCCAGCTGCGACTGGATCCGCAATGCGCAGAACCTCATCCTGACGGG
GCCAACCGGCGCTGGGAAAACGTGGATCGCTTGTGCGTTCGGGCAACAGGCCTGCCGACAAGGATTCTCTGTGTCGTACG
TCCGTGTTGCCCGCCTGTTCGAGGAATTGAAGATCGCCCATGGCGACGGCAGCTTCACGCGGCAGCTCGCGCAGCTCGCC
AAGATGGACGTCTTGCTGCTCGACGACTGGGGGCTGCAGGATCTCGATCAGACCGCCCGAAATGATCTACTTGAAGTACT
CGACGATCGCTTTGGCACCCGCTCCACGATCATTACCAGCCAACTACCACTGGAACACTGGCACGCATGGTTGCAGGACC
CGACGCTTGCCGACGCGATCCTCGATCGGCTCGTCCATCAGGCCCACAAGCTGCCATTGAAGGGTGAATCGATGCGAAAG
ACCAGCGCCAAGCAATCCTCCGCATCCTGA

Protein sequence :
MLMQQTLTQLKSLKLDGMARAFEEQAALTASASLSFEERFGIVVERELAWRDTRRLERLLKSAKLKNPQACIEDIEYRQS
RGIDKSVVAALASCDWIRNAQNLILTGPTGAGKTWIACAFGQQACRQGFSVSYVRVARLFEELKIAHGDGSFTRQLAQLA
KMDVLLLDDWGLQDLDQTARNDLLEVLDDRFGTRSTIITSQLPLEHWHAWLQDPTLADAILDRLVHQAHKLPLKGESMRK
TSAKQSSAS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
APECO1_3529 YP_854246.1 ISEc12 ATP-binding protein Not tested PAI I APEC-O1 Protein 3e-36 46
unnamed CAC39295.1 hypothetical protein Not tested LPA Protein 2e-36 46
ORF_5 AAZ04416.1 putative transposase subunit Not tested PAI I APEC-O1 Protein 2e-36 46
VPI2_0004c ACA01821.1 IstB protein Not tested VPI-2 Protein 1e-34 42