Gene Information

Name : RBRH_00630 (RBRH_00630)
Accession : YP_004030649.1
Strain :
Genome accession: NC_014723
Putative virulence/resistance : Unknown
Product : transposase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG4584
EC number : -
Position : 84031 - 85446 bp
Length : 1416 bp
Strand : +
Note : Transposase; COG: Transposase and inactivated derivatives; Pfam: Integrase core domain::PF00665

DNA sequence :
TTGATGCCGGCACATCGGATGAGTATGCGCAAACTGAAGGAAGTACTGCGGCTGAAGTGGGCGTGCGGCCTGTCGCACCG
CCAGATCAGCCGGGCGATCGGCATCAGCGTCGGCGCCATCTCGGCATACGCCGCACGCGCCAGCGCGGCGGGCCTCGACT
GGGCTGCCGTCGAAGCACTCGCCGACGACGAGCTCGAGATCAGGTGGGAGCTGCCTGCGCAGACGGCGCTCTCGAGCCGA
AGGGTTGAACCGGACTACGCGGCGATGCACCGTGACCTGCGCCGTAAGGGCGTGACGTTGCAACTGCTCTGGGAAGAATA
TGTTGAGGCCCACCCCGGCCAGCGCACCTACCGCTATACGCAGTTCTGCCAGCGATACAAGGACTGGGCCGCAGTGCTGA
AGCGCTCGATGCGCCAACAGCACCGTGCCGGCGAGAAGCTGTTCGCCGACTTCGCTGGGCAAACCGTGCCGGTCCTCAGT
CGCGATGGCGGCGTCGCGTTCAAAGCGCACGTCTTCGTGGCCGTGCTCGGCGCGTCGAACTACACGTACGCATGTGCGAC
GCGTTCCGAGACGATGTCCGACTGGATCGGCAGCCTGATCGACGCGATGGAATTCTACGGCGGCGTTCCCGAACTGCTGG
TGCCCGACAACCCCAAGGCGCTGATCGCCAAAGCCGATCGCTACGAACCGGTGCTGGGCAACACCACGCAGGACTTCGTG
AACCACTACGCGACCGCCATGTTGCCGGCGCGGCCGTGCAAGCCGCAGGACAAGGCGAAAGTCAAGGTCGGCGTACAGAT
CGTAGAGCGCTGGATCCTCGCACGGCTTCGCAATCACCGGTTCTACAGCCTGGCCGAACTGAACAAGGCGATCGGCCAGC
TGATCGCCGATCTGAACCAACGGCCGTTGAAGAAGCTCGACGGCAACCGCCGCGAATGGTTCGAGCGGCTCGACAGACTG
GCGCTGCGCCCGTTGCCGACCCATCGATACGAGATCGCGACCTTCGTGAAGTGCCGCGTCAGCATCGACTACCGCGTCGA
AGTCGATCACCACTATTACAGCGTTGCGCACAGCCTCGTGCGTCAAGAGGTCTACGCCCGCGTCACCCGCCACGGTGTCG
AGATCTTGCACCGCGGCAAACGCGTTGCCGCTCACGTCCGCAGGAAACTCCGGAACAAGCATACGACGTTGCCCGAGCAC
ATGCCGGCGGCGCACCGCGCCCACATGGAATGGACGCCCAAGAGATTGCTGAACTGGGGCGCCTGCATCGGTCCCGGTGC
CGAGGCGATCGCCAAACACTTGCTGACCAACCGGCCGCACCCGAGATGGGGTACCGCGCGTGCCTCGGACTGCTGTCGCT
CTCGCGCAAGTACGGCAAGGACCGGCTGGAAGCCGCCTGCCAGCGGGCACTCGTGA

Protein sequence :
MMPAHRMSMRKLKEVLRLKWACGLSHRQISRAIGISVGAISAYAARASAAGLDWAAVEALADDELEIRWELPAQTALSSR
RVEPDYAAMHRDLRRKGVTLQLLWEEYVEAHPGQRTYRYTQFCQRYKDWAAVLKRSMRQQHRAGEKLFADFAGQTVPVLS
RDGGVAFKAHVFVAVLGASNYTYACATRSETMSDWIGSLIDAMEFYGGVPELLVPDNPKALIAKADRYEPVLGNTTQDFV
NHYATAMLPARPCKPQDKAKVKVGVQIVERWILARLRNHRFYSLAELNKAIGQLIADLNQRPLKKLDGNRREWFERLDRL
ALRPLPTHRYEIATFVKCRVSIDYRVEVDHHYYSVAHSLVRQEVYARVTRHGVEILHRGKRVAAHVRRKLRNKHTTLPEH
MPAAHRAHMEWTPKRLLNWGACIGPGAEAIAKHLLTNRPHPRWGTARASDCCRSRASTARTGWKPPASGHS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
APECO1_3528 YP_854247.1 transposase for ISEc12 Not tested PAI I APEC-O1 Protein 5e-84 48
ORF_6 AAZ04417.1 putative transposase subunit Not tested PAI I APEC-O1 Protein 3e-84 48
unnamed CAC39294.1 hypothetical protein Not tested LPA Protein 6e-84 47
VPI2_0005c ACA01822.1 IstA Not tested VPI-2 Protein 5e-84 43