Gene Information

Name : RBRH_00763 (RBRH_00763)
Accession : YP_004030675.1
Strain :
Genome accession: NC_014723
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 112411 - 113235 bp
Length : 825 bp
Strand : +
Note : Hypothetical protein; COG: Predicted transcriptional regulators; Pfam: Domain of unknown function (DUF932)::PF06067

DNA sequence :
ATGCAATTTGTATCCCGCTTCGCTTACCGTTCGCCGGTACTGCGCTCGGAACGTGCTTTGTCGGATGACCAGATTCGCGC
CGTGGCCCCGTCCATCTTCGCGGATGCCTCGCACGAAAGCCGCTCGCCGCGGTACAGCTATATCCCCACCGCCACAGTGC
TGCAAGAACTGCGCGGCGAAGGCTTCGAGCCTTTCATGGTGTGCCAGACTCGCGTGCGGCAAGACGGCCGCCGCGCCTAC
ACCAAGCACATGATTCGGCTACGCCATGCCAGTCAAATCAGTAGCCGCGAAGCTAACGAGATCATTTTGTTGAACTCCCA
TGATGGAACGAGCAGCTATCAGATGCTCGCCGGGATGTTCCGCTTCGCGTGCCAGAACGGTCTCGTTTGCGGCGATACGG
TAGCCGACGTGCGCGTGCCCCATAAGGGCGACGTGGCCGCGCAGGTCATCGAAAGCGCTTACAAAGTCTTGCACGGCTTC
GAGCGAGCGCAGTCATCCCGCAATGCCATGCGGTCCATCACGCTGGACAACGGCGAAGCCGAGGTGTTCGCCCGTGCCGC
ACTGGCATTGAAGTATGACGAGGACAAGCCCGCGCCCATCACGGAGTCGCAAATCCTGATGCCGCGCCGCACGGATGACA
ATCGCCACGACTTGTGGAGCGTGTTCAACCGCACGCAAGAAAACCTTATCAAAGGCGGCTTGTCCACTCGCGCCGCGAAT
GGTCGCCGCCAGACTACGCGCCCGGTGCCGAGCATCGACAACGACATCCGCCTGAATCGTGCCTTGTGGCTGCTGGCCGA
GGGCCTGCGCCAGTTGAAAGCCTGA

Protein sequence :
MQFVSRFAYRSPVLRSERALSDDQIRAVAPSIFADASHESRSPRYSYIPTATVLQELRGEGFEPFMVCQTRVRQDGRRAY
TKHMIRLRHASQISSREANEIILLNSHDGTSSYQMLAGMFRFACQNGLVCGDTVADVRVPHKGDVAAQVIESAYKVLHGF
ERAQSSRNAMRSITLDNGEAEVFARAALALKYDEDKPAPITESQILMPRRTDDNRHDLWSVFNRTQENLIKGGLSTRAAN
GRRQTTRPVPSIDNDIRLNRALWLLAEGLRQLKA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF C80 AAN62174.1 conserved hypothetical protein; associated with oriT region on plasmids Not tested PAGI-2(C) Protein 6e-104 76
ORF SG86 AAN62307.1 conserved hypothetical protein Not tested PAGI-3(SG) Protein 4e-105 75
yafZ CAE85199.1 YafZ protein Not tested PAI V 536 Protein 4e-74 54
SF2994 NP_708768.1 hypothetical protein Not tested SHI-1 Protein 1e-72 53
unnamed CAD42096.1 hypothetical protein Not tested PAI II 536 Protein 8e-70 53
z1215 CAD33785.1 Z1215 protein Not tested PAI I 536 Protein 1e-70 53
unnamed CAI43843.1 hypothetical protein Not tested LEE Protein 7e-72 53
aec71 AAW51754.1 Aec71 Not tested AGI-3 Protein 7e-72 53
ECO103_3587 YP_003223444.1 hypothetical protein Not tested LEE Protein 5e-72 53
yafZ ADD91704.1 YafZ Not tested PAI-I AL862 Protein 7e-72 53
S3199 NP_838482.1 hypothetical protein Not tested SHI-1 Protein 1e-72 53
ORF_47 AAZ04456.1 conserved hypothetical protein Not tested PAI I APEC-O1 Protein 2e-70 52
c5156 NP_757004.1 hypothetical protein Not tested PAI II CFT073 Protein 3e-70 52
yafZ YP_854321.1 hypothetical protein Not tested PAI I APEC-O1 Protein 3e-70 52
unnamed CAD66201.1 hypothetical protein Not tested PAI III 536 Protein 7e-71 52
Z1215 NP_286750.1 hypothetical protein Not tested TAI Protein 2e-71 52
Z1655 NP_287158.1 hypothetical protein Not tested TAI Protein 2e-71 52

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
RBRH_00763 YP_004030675.1 hypothetical protein VFG1526 Protein 8e-71 53
RBRH_00763 YP_004030675.1 hypothetical protein VFG0658 Protein 5e-73 53
RBRH_00763 YP_004030675.1 hypothetical protein VFG1615 Protein 4e-70 53
RBRH_00763 YP_004030675.1 hypothetical protein VFG1676 Protein 4e-71 52