Gene Information

Name : RBRH_03335 (RBRH_03335)
Accession : YP_004028130.1
Strain : Burkholderia rhizoxinica HKI 454
Genome accession: NC_014722
Putative virulence/resistance : Unknown
Product : integrase/recombinase (XerD/RipX family)
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG4974
EC number : -
Position : 448585 - 449511 bp
Length : 927 bp
Strand : +
Note : -

DNA sequence :
ATGAGCGACGTGCAAGTCCAACAGGCGAGTGCGTCTCGCGACACGAGCGCGCAGGCGATCGACGCATTTTGCGACGCGCT
ATGGCTCGAGCATGGGTTGTCCCGCAATACACTGGATGCGTATCGGCGCGACTTGTCGCTGTATTGCGACTGGCTCGCGG
CGACGCACGAGCGCACGCTTGACGCGACGCGCGAGTCGGACTTGAACGGCTACCTGGCGGTGCGCAGCGATGGCAAGGCC
AGTTCCGCGAACCGGCGCCTGTCGGTGTTCCGGCGCTACTTCGCGTGGGCGCTGCGTGAGCATCGCGTCGCGGCCGATCC
GACGCTGCGCATCCGCTCGGCCCGGCAACCGCCTCGTTTTCCGTCCTCGCTCAACGAAGCCCAAGTCGAGGCGTTGCTGG
GTGCACCGGACCTGGACACGCCACTTGGATTGCGCGACCGCGCGATGCTTGAGCTGATGTACGCGAGTGGGCTGCGTGTT
TCGGAGTTGGTCACGCTCAAGACGGTCGAGGTGGGGTTGAACGAGGGTGTGGTGCGCGTGATGGGTAAGGGCGCGAAAGA
GCGCCTGGTGCCGTTTGGCGACGAGGCCCGAGGCTGGCTGGAGCGCTACCTGCGCGACGCGCGCGCGGTGCTCCTCGGGG
CGCGCGGCGCCGACGCCCTGTTCGTGACGGCGCGCGGCGGCGCGATGACGCGTCAGCAATTCTGGAACATTATCAAGCGA
TATGCGTTGCGCGCCGACATTCATGTGCCGCTGTCGCCGCATACGTTGCGGCATGCGTTCGCGACGCATCTGCTCAATCA
TGGCGCGGACCTGCGTGTGGTGCAGATGCTGCTTGGCCACAGCGATATTTCAACGACTCAGATTTACACCCATGTCGCAC
GCGAGCGCCTCAAGGCGCTGCATGCGATCCATCATCCGCGTGGTTGA

Protein sequence :
MSDVQVQQASASRDTSAQAIDAFCDALWLEHGLSRNTLDAYRRDLSLYCDWLAATHERTLDATRESDLNGYLAVRSDGKA
SSANRRLSVFRRYFAWALREHRVAADPTLRIRSARQPPRFPSSLNEAQVEALLGAPDLDTPLGLRDRAMLELMYASGLRV
SELVTLKTVEVGLNEGVVRVMGKGAKERLVPFGDEARGWLERYLRDARAVLLGARGADALFVTARGGAMTRQQFWNIIKR
YALRADIHVPLSPHTLRHAFATHLLNHGADLRVVQMLLGHSDISTTQIYTHVARERLKALHAIHHPRG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00307 YP_008207772.1 Site-specific recombinase XerD Not tested AbaR25 Protein 3e-59 56
BJAB0868_00311 YP_008211637.1 Site-specific recombinase XerD Not tested AbaR26 Protein 3e-59 56