Gene Information

Name : RBRH_03212 (RBRH_03212)
Accession : YP_004028027.1
Strain : Burkholderia rhizoxinica HKI 454
Genome accession: NC_014722
Putative virulence/resistance : Virulence
Product : Thioredoxin peroxidase
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG2077
EC number : 1.11.1.15
Position : 342442 - 342942 bp
Length : 501 bp
Strand : -
Note : -

DNA sequence : 
ATGAGCCAAGTCACTCTCGGAGGTAATCCGATCGAAGTCGCCGGTACGCTGCCAGCCGTCGGCCAGAAGGCCGCGCCATT
CTCACTGGTCGGCAAGGACCTGGCGGACGTGAAACTCAACGACTTCGCTGGCAAGCGCAAGGTCCTGAACATCGTGCCGA
GCCTGGATACGCCCACCTGCGCAACATCAACGCGCAAGTTCAATGAAGCGGCAAGCAAGCTGGAGAACACCGTCGTCATC
GTGATTTCGGCCGACTTACCGTTTGCGGCGACGCGGTTCTGCACGACCGAAGGCATCGAGAACGTGATCACGGCGTCGAC
GTTCCGTAACCGGGAGTTCGCCGGCCAATACGGGGTGGAGATCAAGACCGGACCGCTGGCCGGCTTGACCGCGCGCGCCG
TCGTCGTGCTCGATGGGGACGACAAGGTGCTGCACGTGGAACGGGTGTCGGAAATTAAAAACGAACCCCATTACGACGCG
GCCCTTGCTGCACTGAAATAA

Protein sequence : 
MSQVTLGGNPIEVAGTLPAVGQKAAPFSLVGKDLADVKLNDFAGKRKVLNIVPSLDTPTCATSTRKFNEAASKLENTVVI
VISADLPFAATRFCTTEGIENVITASTFRNREFAGQYGVEIKTGPLAGLTARAVVVLDGDDKVLHVERVSEIKNEPHYDA
ALAALK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tpx YP_001216305.1 thiol peroxidase Not tested VPI-1 Protein 1e-32 45
tpx NP_230472.1 thiol peroxidase Virulence VPI-1 Protein 1e-32 45
tagD AAK20751.1 toxR-activated gene D protein Virulence VPI Protein 1e-32 45
tagD AAK20781.1 toxR-activated gene D protein Virulence VPI Protein 9e-33 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
RBRH_03212 YP_004028027.1 Thioredoxin peroxidase VFG0087 Protein 4e-33 45