Gene Information

Name : RBRH_02022 (RBRH_02022)
Accession : YP_004030148.1
Strain : Burkholderia rhizoxinica HKI 454
Genome accession: NC_014722
Putative virulence/resistance : Unknown
Product : transposase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2963
EC number : -
Position : 2390147 - 2390542 bp
Length : 396 bp
Strand : +
Note : -

DNA sequence :
GTGTTTGTGACTAACACTAGGCAGGAAGTGATGGAAGTGTTGAGGGGCCCGGAGCGGCGACGACGCTGGTCGGCTGAGCA
GAAGCTGACAATGGTGCGGGAGGGTTTCGAGCCGGGGAAATCGGTCTCGATGGTCGCGCGCCAACACGGCGTGAATCCGA
ACCCGCTATTTCACTGGCGCAAACTGTATCATGACGGAAGCCTGTCGGCGGTTAAGGCTGGCGAGGAAATCGTACCGGCG
TCGGAACTGGCCGACGCGCTCAAGCAGGTTCGGGAGCTGCAACGACTGCTTGGCAAGAAGAGCCTGGAGAACGAGATTTT
GCGCGAGGCAGTTGAATACGGGCGAGCAAAAAAGTGGATTGCGCGCTCACCCTTGCTGCCGCAGGACGATCCGTGA

Protein sequence :
MFVTNTRQEVMEVLRGPERRRRWSAEQKLTMVREGFEPGKSVSMVARQHGVNPNPLFHWRKLYHDGSLSAVKAGEEIVPA
SELADALKQVRELQRLLGKKSLENEILREAVEYGRAKKWIARSPLLPQDDP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
S3188 NP_838471.2 insertion sequence 2 OrfA protein Not tested SHI-1 Protein 6e-39 65
S4060 NP_839229.2 insertion sequence 2 OrfA protein Not tested SHI-2 Protein 6e-39 65
tnpG AAD44740.1 TnpG Not tested SHI-2 Protein 4e-39 65
unnamed AAL57520.1 IS2 transposase Not tested LEE Protein 4e-39 65
st02 CAC81840.1 ST02 protein Not tested LEE II Protein 4e-39 65
ECO26_5247 YP_003232129.1 insertion sequence 2 OrfA protein Not tested LEE Protein 6e-39 65
insC YP_854262.1 IS2 transposase Not tested PAI I APEC-O1 Protein 4e-27 65
c5196 NP_757044.1 transposase insC Not tested PAI II CFT073 Protein 4e-27 65
insC AAZ04431.1 IS2 conserved hypothetical protein Not tested PAI I APEC-O1 Protein 3e-27 65
S4049 NP_839217.2 insertion sequence 2 OrfA protein Not tested SHI-2 Protein 2e-38 64
aec50 AAW51733.1 Aec50 Not tested AGI-3 Protein 1e-39 64
SF2984 NP_708758.3 IS2 ORF1 Not tested SHI-1 Protein 3e-39 64
SF3709 NP_709448.3 IS2 ORF1 Not tested SHI-2 Protein 9e-39 64
SF3722 NP_709461.3 IS2 ORF1 Not tested SHI-2 Protein 9e-39 64
insC YP_002414034.1 IS2 insertion element repressor InsA; KpLE2 phage-like element Not tested Not named Protein 5e-27 62
unnamed AAL67376.1 insertion sequence protein Not tested PAI II CFT073 Protein 1e-26 57

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
RBRH_02022 YP_004030148.1 transposase VFG0648 Protein 8e-40 64
RBRH_02022 YP_004030148.1 transposase VFG0622 Protein 3e-39 64
RBRH_02022 YP_004030148.1 transposase VFG0609 Protein 3e-39 64
RBRH_02022 YP_004030148.1 transposase VFG1733 Protein 1e-27 62