|
Name : RBRH_00121 (RBRH_00121) Accession : YP_004029437.1 Strain : Burkholderia rhizoxinica HKI 454 Genome accession: NC_014722 Putative virulence/resistance : Unknown Product : tail sheath protein gp18 Function : - COG functional category : R : General function prediction only COG ID : COG3497 EC number : - Position : 1705175 - 1706506 bp Length : 1332 bp Strand : - Note : - DNA sequence : ATGGACAATGAATGTAAAGAGGGGATCATGGTTGATTACAAGGTACCTGGGGTGTATGTGGAGGAGCCGTTTGAGCTGGC GCTGTCAATTCCGGCGGGCGAGACAGCGATTCCAGTGTTTGCATGTGACGACGTCAAGCAGTCTAAGGTTTCCGATCTGC AGGATGGGCAGGAAATCCAGTCGTGGCTGGACGTAAACCAACTCATCGCAAAACAGCGCGATCCACTGCAGCAAGCGGTG GCCAACGCAACAACGACAGACAGCTTGAAGACAGCTCAGGAGGCGTTGAATAATTTTAACGACGCTTTGTTAAGCGATCC GCTGTATCTGTCGTTGAAGACGTATTTCGACAACGGTGGCGGGCGGGCCTACGTGATGAACGTGAATTCGCTGGCATCGG CCGTGCCGGGGTTCGACGACATCACGTTACTGGTGCAGGCCGGGGCAAAACTAGACAGTTTCAAGACGTCTGTCAGCACA CTCTGCAAGCCGGGCAACACGTACTTTGCGGTATTCGACGGGCCGTCTGAAGAAATCGATCGTAACGGTCAGGTGACCGC CTCGACAGCTAGTATAGGCAGCGATCAAGAGACGCAGAAAAAGGCAAAGAACGCAACAGAACCAAAAGACGCAACAGAAC AAAAGAACGCAACAGACCCAACAAAAGACTACGACTCGAATCCGTACACGGCAGCGTACTACCCGTGGCTGCAGGCAGAC TGGGCGATTAAGTCAGATAAGACGCGCGTTGACATCCCGCCGAGCGCGGCGGTTGCGGGCGCGTATTGTACAGTAGACCG TGAACGTGGGGTGTGGAAGGCGCCGGCCAACGTGGCGCTCAAAGGCGGCGTGACGCCAAAGTATAAAGTGTCCAATGATC TCAACGGAATACTGAATGTGCCGAGCTCGGGCGGCAAAGCAATCAACGTGATTCGCACGTTTCGTGGCATGGGTCCGTTG ATTTGGGGGGCGCGTACATTGAAGTCTGACCTGGACACGTGGCGGTATGTGCCGGTGCGGCGCCTGTTCAATGCGGTGGA AAAAGACGTGCACCGTGCGATGGGGGTAGCGGTATTCGAGCCTAACAGCGCGCCGACGTGGGAGCGGGTGCGCAGTGCTA TCGATATTTATCTGCACAATCTATGGAGGCAAGGAGCACTGCAGGGCAGTACGCCGCAGCAAGCATATTTTGTGCAGGTT GGACTGGGCCAGACGATGACGGCAGACGACATTAATAACGGCAAGCTGATTGTGCAGATTGGTCTGGCGGCGGTGCGTCC GGCCGAGTTCATCATCTTGCAAGTGTCGCAGCAGCAGCTATCGGTATCGTGA Protein sequence : MDNECKEGIMVDYKVPGVYVEEPFELALSIPAGETAIPVFACDDVKQSKVSDLQDGQEIQSWLDVNQLIAKQRDPLQQAV ANATTTDSLKTAQEALNNFNDALLSDPLYLSLKTYFDNGGGRAYVMNVNSLASAVPGFDDITLLVQAGAKLDSFKTSVST LCKPGNTYFAVFDGPSEEIDRNGQVTASTASIGSDQETQKKAKNATEPKDATEQKNATDPTKDYDSNPYTAAYYPWLQAD WAIKSDKTRVDIPPSAAVAGAYCTVDRERGVWKAPANVALKGGVTPKYKVSNDLNGILNVPSSGGKAINVIRTFRGMGPL IWGARTLKSDLDTWRYVPVRRLFNAVEKDVHRAMGVAVFEPNSAPTWERVRSAIDIYLHNLWRQGALQGSTPQQAYFVQV GLGQTMTADDINNGKLIVQIGLAAVRPAEFIILQVSQQQLSVS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| orf14 | AAN64218.1 | Orf14 | Not tested | necrotizing factor locus | Protein | 7e-76 | 45 |
