Gene Information

Name : RBRH_00101 (RBRH_00101)
Accession : YP_004029416.1
Strain : Burkholderia rhizoxinica HKI 454
Genome accession: NC_014722
Putative virulence/resistance : Unknown
Product : hemolysin activator protein
Function : -
COG functional category : U : Intracellular trafficking, secretion and vesicular transport
COG ID : COG2831
EC number : -
Position : 1678239 - 1680323 bp
Length : 2085 bp
Strand : -
Note : -

DNA sequence :
GTGCACTGCTTGCTGCCAATGATGACCTGCTGCTTGCAGCGTGGCTGGGTCACCCCCTCACCGGTGAGGAATGGCACGTC
ATGGGTCGCTCGCCGCGGTCTGATCGATGGGAATTCGCGTCTGGGGTGCCTTCACCGGATCCTTAAAGTGTCCCGGCTGG
AAACGGGATGTACCCGATCAACATGGTGGCGCCGGGCCGATCGTTTCTTCATGCCTTCACGCTCGCGGTCCGCCGTCATA
ACGGAGGGGTGCGGCGGCTGCTCGAGTGTGTGGTGTGCGAGTTCTGCTAGGATGGGTCCCAGCGTGTTTTATTTAGGCCG
CAGCGCTAGGCATAAAATGATTATTACGACAAGGAAAAAGGCGAAGCAGGCGGTTTGTCATCGCCAGTGGAGCAGAAAAG
GGGTAGGGTTTTGCGTGGGTCTGGCGCCCATGATGTTGGCGCAAGCGCTACCGCTTGAGGGTACCGAGCAGCAGCCGCTG
CGAGAACAGGAGCGCGAGCGCGTACTTCGGCAGCAGCGCGAGGCCACGCCGGACGTGCGGTTGGCACGCCCGTTCGTGCC
TGAGCAAGCGCGTCTTCCTGTGGAAGAGTCACCCTGTTTCCGCATCGAGCGCATTAAACTCGACGGTGACATGGCCATGC
ATTTTCAGTGGGCGTTGGCAGCGGCCAATCCGCCGAACGATCCGGCCATTGGACGCTGTCTGGGCACGGCAGGCATCAAC
CTGACGATGAAGCGGATGCAAAACGCGATCGTCGCGCGTGGTTACGTGACCACGCGCGTGCTAGCACCCCCGCAGGATTT
GAAGACCGGCACGCTTGCACTTACGCTTATTCCGGGGCGGATCCGAGCGATTCGTTTCGCCGACGACAGCAGCCCGCGCG
CGACGTGGTGGAACGCCGTGCCAGTTACCTCAGGCGATTTGCTCAACCTGCGTGACATCGAGCAGGGGCTAGAAAACTTT
AAGCGTGTGCCGACGGCCGACGCTGACATCCAAATCACGCCGGCCGAAGGGCCCGACGCCCAGCCTGGCGAGAGCGACCT
GGTGATTGCGTGGACACAGGCGCATCCGGTCCGCCTGAACGTCGCTATCGACGATGCAGGCAGCCGGTACACCGGTCGAT
ACCAGGGTAGTGTGACTGTTTCATACGACAACTGGTGGACGCTTAATGATTTATTTTACGCCAGCTTTAACCACGACCTT
GGCGGCGGGCACAGCGGCCCCAAAGGCACGCGTGGCTATACCGTTCACTATGAGGTGCCGTATCGTTACTGGCTCTTGGG
CTTCACGACCAGTGGCTATGATTATCACCAGTCGGTCGCGGGTGCTTACCAAACTTACCGCTACGGTGGCGATGGCGATT
TCACTGAGGTGCGCCTCTCGCGCCTGCTTTATCGCGATGCCGTGCGCAAGACCTACGCCCATGTGCGCGGGTGGTTACGC
CATGCGCGCAGCTTCGTTAATGGCACCGAGATCGGGGTACAGCGCCGCCACACGGCAGGCTGGGAAATCGGGTTAAGTCA
CCGCGAATTCATCGGCTCCGCCACGCTGGAGAGCGGCGTGGCGTACCGCAAGGGTACGGGCATGTTGGGGGCTCAGCCGG
CGCCGGAGGAATTTTTGGGTGAGGGGACGTCGCGTCCATCGCTGATTACCGCGGATGCCCAACTGACCATTCCATTTACC
ATCGCTGCACAGCAACTGCGCTACACCACGGCATGGCGCGGACAATGGAGCCGCACACCGCTGGCGTTGCCGGAACGCTT
TTCCATCGGTGGGCGCTATACCGTGCGCGGTTTTGATGGCGAAAGCGCCTTGATCGGCGACCGAGGCTGGCTGGTGCGCA
ATGACCTAGGCTGGTCGCTGGGCCACACCGGTCAGACGCTTTATCTGGGTGCGGATTATGCAGAAGTGGGCGGGCCGTCC
ACAAGCTTTTTGATTGGGCAGCACTTAGCGGGTGCCGTGATTGGCCTGCGCGGCGGGGCCAAGGGCTTGTTTTGGGATGT
TTTTGCCGGTACGCCGCTTAGCAAGCCGGCGGGTTTTCAGACCCGTCGCTTCAATGCCGGCTTTAACGTCAGCTGGTCGT
ATTAG

Protein sequence :
MHCLLPMMTCCLQRGWVTPSPVRNGTSWVARRGLIDGNSRLGCLHRILKVSRLETGCTRSTWWRRADRFFMPSRSRSAVI
TEGCGGCSSVWCASSARMGPSVFYLGRSARHKMIITTRKKAKQAVCHRQWSRKGVGFCVGLAPMMLAQALPLEGTEQQPL
REQERERVLRQQREATPDVRLARPFVPEQARLPVEESPCFRIERIKLDGDMAMHFQWALAAANPPNDPAIGRCLGTAGIN
LTMKRMQNAIVARGYVTTRVLAPPQDLKTGTLALTLIPGRIRAIRFADDSSPRATWWNAVPVTSGDLLNLRDIEQGLENF
KRVPTADADIQITPAEGPDAQPGESDLVIAWTQAHPVRLNVAIDDAGSRYTGRYQGSVTVSYDNWWTLNDLFYASFNHDL
GGGHSGPKGTRGYTVHYEVPYRYWLLGFTTSGYDYHQSVAGAYQTYRYGGDGDFTEVRLSRLLYRDAVRKTYAHVRGWLR
HARSFVNGTEIGVQRRHTAGWEIGLSHREFIGSATLESGVAYRKGTGMLGAQPAPEEFLGEGTSRPSLITADAQLTIPFT
IAAQQLRYTTAWRGQWSRTPLALPERFSIGGRYTVRGFDGESALIGDRGWLVRNDLGWSLGHTGQTLYLGADYAEVGGPS
TSFLIGQHLAGAVIGLRGGAKGLFWDVFAGTPLSKPAGFQTRRFNAGFNVSWSY

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
S1 AAQ19124.1 putative hemolysin activator HlyB Not tested PAI I CL3 Protein 1e-105 47
NMB1762 NP_274762.1 hemolysin activation protein HecB Not tested IHT-C Protein 4e-100 45