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Name : RBRH_03718 (RBRH_03718) Accession : YP_004029029.1 Strain : Burkholderia rhizoxinica HKI 454 Genome accession: NC_014722 Putative virulence/resistance : Unknown Product : transcription accessory protein (S1 RNA binding domain) Function : - COG functional category : K : Transcription COG ID : COG2183 EC number : - Position : 1245867 - 1248272 bp Length : 2406 bp Strand : - Note : - DNA sequence : TTGTGTCACGCCCGGCCCGCATCGCGCTTATGGCAAAATGCCCGGCTCGAACCTGCACAAGCCTCACCCATGACGGACAA CGTAGCCCTAAAGATCGTACAGCGCATCGCCACCGAATTGACTGTCCAGCCGCGGCAGGTCGCCGCTACCGTACAACTGC TCGACGAAGGATCAACCGTCCCGTTCATCGCGCGCTACCGCAAAGAAGTCACCGGCAACTTGGACGACACGCAACTGCGC TTGCTCGAGGAGCGGCTACTGTACCTGCGCGAGCTCGAGGATCGTCGCGCGGCGATCCTGCAAAGCATTGACGAGCAGGG CAAGCTGACTGATACGTTGCGCACCGCGATCCTAGCCGCCGACATGAAACAGGCGCTCGAAGATCTTTACCTGCCGTACA AACCCAAGCGTCGCACACGTGCGCAAATCGCGCGCGAGGCGGGGCTGCAGCCTCTGGCGGATGCGTTGCTCGCGGATCCG ACGCGCGATCCACACGCGCAGGCCGCCCATTTCGTCAATGCCGACAAAGGCGTTGCCGACATCAAGGCGGCGCTGGACGG CGCGCGCGACATCCTGTCCGAGCAGTTCGGCGAGACAGCCGAGTTACTGGGCCGACTGCGCAACTACCTGTGGAATCAGG GCGTAGTGATCTCCACTGTCGTCGAGGGCAAGGAAAAAGAGGAAGGCGAGAAATTCCGCGATTACTACGATTACGCGGAG ACGATCAAGACGGTGCCATCGCACCGCGCGCTCGCGCTGTTCCGGGGCCGCAATGCCGGCGTGCTGTTCGTTAAGCTCGG CTTGGGCGAGGAGCTTGATGCACAAGTGCCGCATCCTGGCGAAGCGATGATTGCGCGCCACTTCGGCATTGCCAATCAAG GGCGGCCGGCCGACAAGTGGCTCGGCGACGTGTGTCGCTGGTGCTGGCGCGTGAAAGTGCAACCGCATTTGGAAAACGAC CTGCTGACCCAGTTGCGCGAGCGCGCCGAGCACGAAGCGATCAATGTGTTCGCACGGAACTTAAAAGACTTATTGCTGGC CGCGCCGGCTGGCCCCAGGGCGGTGATCGGATTGGACCCGGGACTGCGCACCGGCGTCAAGGTGGCGGTAGTCGATCGCA CTGGCAAGCTGCTGGCCACCGATACGATTTATCCGCATGAACCGCGCCGCGATTGGGACGGGTCGCTGGCCCGGCTCGCG CGGCTCGCCCAAGCGACGCAGGCCGAGCTGATCAGCATCGGCAACGGTACCGCATCGCGTGAAACCGACAAGCTGGCCAG CGAGCTCATCGCCCGACATCCCGAACTGAAGCTGCAAAAGATCGTCGTCTCCGAGGCGGGCGCGTCGGTGTACTCGGCGT CGGAGCTGGCGGCGAAGGAATTTCCCGAATTGGACGTATCGTTGCGCGGCGCGGTTTCGATCGCGCGCCGCCTGCAGGAT CCGCTCGCCGAGCTGGTGAAGATCGAGCCAAAGGCGATCGGTGTGGGCCAGTACCAACATGACGTCAACCAGCGGGAACT GGCACGCACGCTGGATGCGGTCGTCGAGGATTGCGTCAACGCAGTGGGTGTTGACGCGAACACCGCATCGATTGCGCTGC TTGCCCGGGTATCTGGCCTGAACGCGACACTCGCACGCAACATCGTCGAGTATCGCGACACCCATGGGCCATTTCCGTCC CGAGAGCACTTGAAAAAGGTGCCGCGCCTGGGCGACAAGACCTTCGAGCAGGCGGCCGGCTTCCTGCGCATCAACCATGG TGAGAATCCATTGGACCGCTCGGCAGTGCACCCCGAGGCCTATCCGGTGGTCGAGCGCATCCTCGCGAAGATCAACAAGT CGGTGTCTGATGTGATGGGCAACCGTGACGTGCTGGCGAAGCTGTGCGCAGCCGAGTTCGTCGATGAACGCTTTGGCCTG CCTACCGTGCGTGACATCCTGGGCGAGCTTGAAAAGCCGGGGCGCGATCCACGGCCCGAGTTCAAGACTGCGACGTTCCG CGAAGGCGTCGAGACGCTCGCCGACCTGTCGCCCGGGATGATTCTCGAAGGGGTCGTGACCAACGTCGCGGCATTCGGCG CGTTCATCGATATCGGCGTACACCAGGACGGGCTCGTGCACGTGTCCGCGATGTCGACGAAGTTCGTGAAGGACCCGCAC GAGGTCGTCAAGGCAGGCCAGGTCGTCACCGTCAAGGTGCTCGAGGTAGACCTAAAGCGGCAGCGCATCTCGCTGACAAT GCGCCTGTCAGACGACGCCGCGGCAGGCGGAGCCGGGGCGGGCAGCACGGCAGCGCGTGACCGGGATGCCGGTGGGCGCG GCGGTCAGGGCCGCGGCGAACGGACCCGGGAGACAGAACCGCAAGGCGCGATGGCAGCCGCGCTCGCCAAGCTCAAGCTG CGCTAA Protein sequence : MCHARPASRLWQNARLEPAQASPMTDNVALKIVQRIATELTVQPRQVAATVQLLDEGSTVPFIARYRKEVTGNLDDTQLR LLEERLLYLRELEDRRAAILQSIDEQGKLTDTLRTAILAADMKQALEDLYLPYKPKRRTRAQIAREAGLQPLADALLADP TRDPHAQAAHFVNADKGVADIKAALDGARDILSEQFGETAELLGRLRNYLWNQGVVISTVVEGKEKEEGEKFRDYYDYAE TIKTVPSHRALALFRGRNAGVLFVKLGLGEELDAQVPHPGEAMIARHFGIANQGRPADKWLGDVCRWCWRVKVQPHLEND LLTQLRERAEHEAINVFARNLKDLLLAAPAGPRAVIGLDPGLRTGVKVAVVDRTGKLLATDTIYPHEPRRDWDGSLARLA RLAQATQAELISIGNGTASRETDKLASELIARHPELKLQKIVVSEAGASVYSASELAAKEFPELDVSLRGAVSIARRLQD PLAELVKIEPKAIGVGQYQHDVNQRELARTLDAVVEDCVNAVGVDANTASIALLARVSGLNATLARNIVEYRDTHGPFPS REHLKKVPRLGDKTFEQAAGFLRINHGENPLDRSAVHPEAYPVVERILAKINKSVSDVMGNRDVLAKLCAAEFVDERFGL PTVRDILGELEKPGRDPRPEFKTATFREGVETLADLSPGMILEGVVTNVAAFGAFIDIGVHQDGLVHVSAMSTKFVKDPH EVVKAGQVVTVKVLEVDLKRQRISLTMRLSDDAAAGGAGAGSTAARDRDAGGRGGQGRGERTRETEPQGAMAAALAKLKL R |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| NMB0075 | NP_273139.1 | transcriptional accessory protein Tex | Not tested | IHT-A | Protein | 0.0 | 64 |
