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Name : RBRH_00781 (RBRH_00781) Accession : YP_004027774.1 Strain : Burkholderia rhizoxinica HKI 454 Genome accession: NC_014722 Putative virulence/resistance : Virulence Product : general secretion pathway protein E Function : - COG functional category : N : Cell motility COG ID : COG2804 EC number : - Position : 103618 - 105144 bp Length : 1527 bp Strand : - Note : - DNA sequence : GTGACGCCTGCCCTTTCTGTACAAACAGGTCCGTCAATGCGTACCGTGACTGCTTCGAGCGAAACCGTTGCCGAGCGCGA GCCGCCGTCGCCGTTGGCCGCGCGGCTGTTGCCTTACGCGTTCGCGCGCAGCGGCCAGATCCTGATCGCGCACCAGCACG CCAGTGGACTGGATGTCTGGATCAGCGAACGCACCAGTGCCGCGGCGCTGGCCGAGGTGGCACGCAACTTCGGCGCGCTG ACGCTGACCCGCTTGCCGTCAGACGAGTTGACGCAGGCGATCAACAACGCGTATGCGCGGCAAGACGGCAGCGCCGCGCA GGTGGTCGGCGAGGTCGAGGGCGAAGTCGACTTGTCCAGGCTGATGCAGGACATTCCGGAGGTCGAGGATCTGCTCGAGT CCGAGGACGACGCGCCGATTATCCGGATGATCAATGCGCTGCTCACGCAGGCTGCCCGCGAAGGCGCGTCGGATATCCAC ATTGAGCCGTTTGAGAACACGTCGGTCGTGCGCTTTCGCGTGGACGGCACGTTGCGCGACGTGGTGCGGCCCAAAAAGGC GCTGCATGGCGCACTGATCTCGCGTATCAAGATCATGGCGCAACTGGACATCGCCGAAAAGCGTTTGCCGCAGGACGGAC GCATTACGTTGCGTGTCGGCGGGCGCCCGGTCGATGTCCGGGTATCGACGCTACCCACCGGTCACGGCGAACGCGCGGTG TTGCGGTTGCTCGAGAAGGATGCGCAGCGACTGAACTTGGAGCGGCTGGGAATGGGCCCCGACACGCTTGCGCAATTCGA CAAGCTGATTGGACGCCCGCACGGCATCGTGCTGGTGACCGGCCCGACCGGCTCGGGCAAGACCACGACGTTGTACGCGG CGCTGTCGCGGCTGGAGACCGAGACGTCGAACATCATGACGGTCGAGGATCCGATCGAGTACGACTTGTCCGGCATCGGG CAGACGCAGGTCAACGATCGCATCGGGATGAATTTTGCCCGCGCGCTACGCTCGATCCTGCGGCAGGACCCGGACATTAT CATGATTGGGGAAATTCGCGACCTGGAGACGGCGCAGATCGCGGTACAGGCGTCGCTGACCGGGCACTTGGTGCTGGCCA CGTTGCACACCAACGATGCGGCATCTGCGGTGACGCGGCTCACCGACATGGGCGTGGAGCCCTATCTGCTTGCTTCGAGC CTGCTGGGCGTGCTGGCGCAACGACTGGTGCGCCAGTTGTGTCCGGTATGCAAGCGACAGAGCGTCGATGATGGTCGTAT GCAGTGGCATCCGGTCGGTTGCGACAAGTGTGGCCACTGCGGCTATACCGGCCGCCGTGGCGTCTATGAACTGTTGCTAA TTGATGACGCGATCCGCACGTTGATTCACCGCAATGCATCGGATGCCGAACTGCTCCAGCGCGCACGCGCGAGCGGCATG CGTACATTGCGCGAGGATGCGCAGCGCTGGCTCGACACCGGTGTGACCTCGCTCGAGGAAGTGCTGCGTGTAACCGGCGG GGAATAA Protein sequence : MTPALSVQTGPSMRTVTASSETVAEREPPSPLAARLLPYAFARSGQILIAHQHASGLDVWISERTSAAALAEVARNFGAL TLTRLPSDELTQAINNAYARQDGSAAQVVGEVEGEVDLSRLMQDIPEVEDLLESEDDAPIIRMINALLTQAAREGASDIH IEPFENTSVVRFRVDGTLRDVVRPKKALHGALISRIKIMAQLDIAEKRLPQDGRITLRVGGRPVDVRVSTLPTGHGERAV LRLLEKDAQRLNLERLGMGPDTLAQFDKLIGRPHGIVLVTGPTGSGKTTTLYAALSRLETETSNIMTVEDPIEYDLSGIG QTQVNDRIGMNFARALRSILRQDPDIIMIGEIRDLETAQIAVQASLTGHLVLATLHTNDAASAVTRLTDMGVEPYLLASS LLGVLAQRLVRQLCPVCKRQSVDDGRMQWHPVGCDKCGHCGYTGRRGVYELLLIDDAIRTLIHRNASDAELLQRARASGM RTLREDAQRWLDTGVTSLEEVLRVTGGE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 1e-116 | 53 |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 7e-117 | 53 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| RBRH_00781 | YP_004027774.1 | general secretion pathway protein E | VFG0182 | Protein | 4e-123 | 55 |
| RBRH_00781 | YP_004027774.1 | general secretion pathway protein E | VFG2048 | Protein | 2e-116 | 53 |
| RBRH_00781 | YP_004027774.1 | general secretion pathway protein E | VFG1876 | Protein | 1e-114 | 51 |
| RBRH_00781 | YP_004027774.1 | general secretion pathway protein E | VFG0233 | Protein | 6e-87 | 50 |
| RBRH_00781 | YP_004027774.1 | general secretion pathway protein E | VFG2426 | Protein | 3e-76 | 47 |
