Gene Information

Name : Calkr_0848 (Calkr_0848)
Accession : YP_004025984.1
Strain : Caldicellulosiruptor kristjanssonii 177R1B
Genome accession: NC_014721
Putative virulence/resistance : Virulence
Product : ATPase AAA-2 domain-containing protein
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG0542
EC number : -
Position : 914671 - 917160 bp
Length : 2490 bp
Strand : +
Note : KEGG: ate:Athe_1825 ATPase AAA-2 domain protein; PFAM: ATPase AAA-2 domain protein; Clp domain protein; AAA ATPase central domain protein; UvrB/UvrC protein; Clp ATPase-like; SMART: AAA ATPase

DNA sequence :
ATGTTTCAAGGAAGGTTTACAGAAAGAGCTGAGAAAGCAATAATGCTTGCGCAGCAGGCTGCTGCCGAGCTTGGCCATAA
CTATGTTGGAACAGAGCACTTGCTTTTGGGACTTATAAGAGAAGGTGGTGGCATTGCTGCAAGAGTTTTGCAAAGCCAGG
GCGTTACTGAAGAAAAGGTGATTGATGAGATTGAAGAACTGATTGGACGGGGCGATTATCAGCTTCCACAGCCACCAACA
GGTTTTACCCCGAGAACAAAAAGAGTGTTTGAGATTGCCTTTATGGAAGCGCGAAGGCTTGGTAGCAGCTATATCAGCAC
AGAACATATCCTTCTTGCTATAATGAGAGAAGGTGAAAGTGTTGCTGTCAGGATTTTGATGGACCTTGGTGTTGACCCAC
AGAGGCTTTTTGAAGAGATTATGAAGCTTTTGAACGAGGATGCAAAAAATGTTGGTGGTGTATCTCCTCAGCAGCAGATC
AATTTCCAAACACAGAACACTCCAACACTAAATCAGTTTAGCAGAGACCTCACCCAGCTTGCTTTGGAGGGCAAAATTGA
CCCTGTTATTGGCCGTGAAAAAGAGATAGAAAGGGTTATTCAGATTTTGTCGAGAAGAACAAAGAACAACCCGTGCTTGA
TTGGTGAGCCGGGTGTCGGTAAGACTGCCATTGTTGAAGGGCTTGCACAAAAGATTGTTGAGGGAAATGTTCCTGAACTT
TTGAGAAACAAAAGGGTTGTGGCTTTAGACCTTTCTGCGATGGTTGCAGGGTCAAAGTTCAGAGGAGAGTTTGAAGAAAG
GCTCAAAAAAGCTATGGAAGAGGTTCGAAAAGCGGGAAATGTCATTCTGTTTATTGATGAGATGCACACCATAATTGGTG
CTGGTGCAGCGGAAGGTGCAATTGATGCGTCAAACATCTTAAAACCTGCTCTTGCACGTGGTGAGATACAGGTCATTGGT
GCAACAACTCTTGATGAGTACAGAAAACACATAGAAAAGGATGCAGCACTTGAGCGAAGGTTCCAGCCAATTTTGGTTGG
TGAGCCAACACCTGAAGAAGCTATACAGATTTTAAAAGGTCTTAGAGACAAATACGAAGCTCATCATGGTGTTAAGATAA
CTGATGAGGCTATAAAAGCTGCTGTTGAGCTGTCTACTAAATATATCACAGATAGATACCTGCCGGACAAAGCAATCGAC
CTTATTGATGAGGCAGCATCAAGGGTAAGGCTCAGAATGTATACTTTGCCCCCGCATGTGAAAGAGTTTGAAGAGAAGAT
TGAAAAGCTTGAGAAGGAAAAAGAAGAGGCTATAAGGCTTCAGGAGTATGAAAAAGCTGCAAAGATAAGAGATGAAATAA
TGAAGCTTCGCCAGGAGCTTGAAAAGATTAAAAATTCATGGACAAATGACCAGCAAAAGACACAGCCAATTGTTACAGAA
GATGACATTGCATACATTGTATCAAGCTGGACAGGAATTCCGGTAAATAGACTTACCGAAGATGAGTCTGAAAGACTTTT
AAAGCTTGAAGAGGTTTTGCACAGACGAGTTGTTGGTCAGGATGAGGCTGTCAAAGCTGTTGCAAGGGCTATAAGACGAG
GAAGAGTTGGGCTCAAAGACCCGAAAAGACCAATTGGTTCGTTTATCTTCCTCGGACCTACTGGTGTTGGTAAAACAGAG
CTTGCGCGAGCTTTGGCAGAGGCACTGTTTGGCACAGAAGATGCTATGATAAGAATCGACATGTCAGAGTATATGGAAAA
GTTCAATGTATCTAAGCTCATCGGTTCGCCTCCAGGGTATGTTGGGTATGAAGAGGGTGGCCAACTTACCGAGAAGGTCA
GAAGAAGACCTTACTCTGTTGTATTGTTTGACGAGATAGAAAAAGCGCACCCTGATGTTTTCAACCTGCTTTTGCAGATA
CTTGACGATGGAAGACTCACAGACTCTCAGGGAAGAACGGTAAGCTTTAGAAATACTGTTATTATCATGACATCTAACAT
TGGTGCAAACCTTATTACAAACCCCAAAAAGTTAGGATTTTCAACTTCAGAGGATGAAAAACAAAGGACATATGAGAGAA
TAAAAGAAAATGTCATGACAGAGCTTAAGAAAACTTTCAGGCCAGAGTTTTTGAACAGAATTGATGAAATTATAGTCTTC
CATCCGCTTGACGAAGAGGATGTTAAAAAGATTGTAGAAATAATGCTCAAAAACTTGCAGGAGAGGATAAAGGCAAGCGA
GTACTATGCAGAGTTTACTACCTCCTTGGTTGAAGCAATTGCTAAAAAAGGATTTGACCCTGTGTTCGGTGCAAGACCGC
TGAAGCGTGCAATCCAGAGCATGGTGGAAGACAAGATTTCAGAGGCTATCTTGGAAGGGAAGATAAAACAGGGCGATGAG
TTCATAGTAGACTATGTTGATGGAAACACAGTGATAATTAAAAAAGAGAAAGCATCTACATCTTCATCTGAAATGGCTCA
GTCACAGTAA

Protein sequence :
MFQGRFTERAEKAIMLAQQAAAELGHNYVGTEHLLLGLIREGGGIAARVLQSQGVTEEKVIDEIEELIGRGDYQLPQPPT
GFTPRTKRVFEIAFMEARRLGSSYISTEHILLAIMREGESVAVRILMDLGVDPQRLFEEIMKLLNEDAKNVGGVSPQQQI
NFQTQNTPTLNQFSRDLTQLALEGKIDPVIGREKEIERVIQILSRRTKNNPCLIGEPGVGKTAIVEGLAQKIVEGNVPEL
LRNKRVVALDLSAMVAGSKFRGEFEERLKKAMEEVRKAGNVILFIDEMHTIIGAGAAEGAIDASNILKPALARGEIQVIG
ATTLDEYRKHIEKDAALERRFQPILVGEPTPEEAIQILKGLRDKYEAHHGVKITDEAIKAAVELSTKYITDRYLPDKAID
LIDEAASRVRLRMYTLPPHVKEFEEKIEKLEKEKEEAIRLQEYEKAAKIRDEIMKLRQELEKIKNSWTNDQQKTQPIVTE
DDIAYIVSSWTGIPVNRLTEDESERLLKLEEVLHRRVVGQDEAVKAVARAIRRGRVGLKDPKRPIGSFIFLGPTGVGKTE
LARALAEALFGTEDAMIRIDMSEYMEKFNVSKLIGSPPGYVGYEEGGQLTEKVRRRPYSVVLFDEIEKAHPDVFNLLLQI
LDDGRLTDSQGRTVSFRNTVIIMTSNIGANLITNPKKLGFSTSEDEKQRTYERIKENVMTELKKTFRPEFLNRIDEIIVF
HPLDEEDVKKIVEIMLKNLQERIKASEYYAEFTTSLVEAIAKKGFDPVFGARPLKRAIQSMVEDKISEAILEGKIKQGDE
FIVDYVDGNTVIIKKEKASTSSSEMAQSQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
clpC YP_005163377.1 ATP-dependent Clp protease ATP-binding subunit Not tested Not named Protein 0.0 55
STY0294 NP_454876.1 ClpB-like protein Not tested SPI-6 Protein 2e-94 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Calkr_0848 YP_004025984.1 ATPase AAA-2 domain-containing protein VFG0079 Protein 0.0 61
Calkr_0848 YP_004025984.1 ATPase AAA-2 domain-containing protein VFG0080 Protein 4e-152 53