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Name : Calkr_0477 (Calkr_0477) Accession : YP_004025639.1 Strain : Caldicellulosiruptor kristjanssonii 177R1B Genome accession: NC_014721 Putative virulence/resistance : Unknown Product : preprotein translocase, seca subunit Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG0653 EC number : - Position : 518605 - 521151 bp Length : 2547 bp Strand : + Note : KEGG: ate:Athe_2104 preprotein translocase, SecA subunit; TIGRFAM: preprotein translocase, SecA subunit; PFAM: SecA DEAD domain protein; SecA preprotein cross-linking region; helicase domain protein; SecA Wing and Scaffold; SEC-C motif domain protein DNA sequence : ATGTTAAAAATAATTGAAAAGCTGATAGGAAGCTACAGCGAAAGAGAGATTAAAAAAATCTTGCCAATAGTTGATAAGAT AGAATCACTTGCACCGGAATATGAGAGATTAACAGATGCAGAGCTGAGGCAAAAGACAGACATATTCAAACAGAGGTTAA AAAACGGCGAGACTTTGGACGATATCCTGCCAGAAGCGTTTGCAGCTGTGCGAGAGGCTGCTTGGCGGACTTTAAAGATG CGCCATTTCAGAGTTCAGTTAATTGGTGGAATAGTTTTGCACCAGGGCAGGATTGCAGAGATGAAAACTGGTGAAGGTAA AACCCTTGTGGCAACTCTACCTGCGTACTTGAACGCTTTAGAGGGCAAGGGTGTTCATATAGTAACTGTTAATGACTACT TGGCAAAAAGAGACGCTGAGTGGATGGGGCCTATTTACAATTTCTTGGGACTTTCTGTTGGTGTTATAGTCCATGGCCTG ACACATGAAGAGAGGAAAAAAGCTTATAGCTGTGATATTACCTATGGTACAAACAACGAGTTTGGGTTTGATTACTTGCG TGACAACATGGCAATTTACAAAGAAGAACTTGTGCAAAGAGAGCTAAACTATGCAATAATCGACGAGGTTGACTCAATCT TGATTGACGAGGCAAGAACGCCTCTTATCATCTCAGGTCCTGCTGAAAAGTCAACAGACCTTTACAAAAGAGCAGACAAT TTCGTAAGAAGACTAAAACCTCTTTATTATAACAGTGATGATGACAAGCAAATGCCAGATACCACTGGCTATGACTATAT AGTAAACGAGAAAAGACACACAGTTTCGCTCACAGAAGAGGGTATCAAGAAAGCCGAGAAATATTTTGGTGTCACAAACT TGGCTGACCCGGAAAATGCAACCCTTCACCACCACATTATCCAGGCACTAAAAGCTCACGCGCTCATGAAAAGAGACAGG GACTATGTTGTAAAAGATGGCCAAGTAATCATCGTTGATGAGTTCACAGGAAGATTGATGTACGGCCGAAGGTTTTCGGA AGGGCTTCACCAAGCCATTGAAGCAAAAGAAGGCGTGAGGATAGAAAGAGAAAGCAAAACTTTGGCAACAATTACCTTCC AGAACTATTTCAGGCTTTACAAAAAACTTGCTGGTATGACAGGTACTGCAAAAACTGAAGAGCAGGAGTTTAGAGAAATC TATAAGCTTGATGTCATAGAAATTCCTACGCACAAGCCAATGATAAGAATTGACCATCCTGACAAGGTTTACAAGACAGA AAAGGCAAAGTTTGAGGCGATTGTTCAGGAGATTGTTGAGACTCACAAAAAAGGTCAGCCTGTTTTGGTTGGCACAGTGT CAATTGAGAAGTCTGAGATGCTGAGCGAGATGCTCAAAAAACATGGCATAAAACATGAGGTTTTAAACGCAAAACACCAC GAAAAAGAGGCTATGATAATTGCAAAGGCTGGTCAAAAAGGTGCTGTGACAATTGCAACCAACATGGCAGGCCGTGGAAC AGACATTGTTTTAGGCGAAGGTGTTGCTGAGCTTGGCGGGCTGAAAGTAATTGGTACAGAGAGGCATGAGAGCAGGCGAA TAGACAACCAGCTCCGAGGAAGAGCCGGCCGTCAGGGTGACCCGGGCGAGTCAAGGTTTTATGTATCGCTTGAGGACGAT TTGATGAGACTTTTCGGGTCTGAGAGGATTAAAAACCTTGTTGAGTCGCTGGGCTTGCCTGATGACCAGCCGATTGAACA CAAGCTCTTGTCTGATGCCATTGAAAAGGCGCAAAAGAGGGTTGAAGCGCGAAACTTTGAGATACGAAAACATCTTTTGC AGTTTGACGATGTTTTGAACAAGCAAAGAGAGATAATATACTCACAAAGGCGCAAGGTTTTAGAAGGCGAGAACTTAAGG GATTCTATCCTTGGCATGATAGATGAGCTTGTGGATTACAAGATAAAGGTGTACACAGGCGAAAGTCCTCATCCTGAAGA CTGGGATATAAAAGGTCTTTTGCAGGATTTGAAGTTTATATTCTTGGATAGTGAGCTTTATGAGCAGGATGCAAAAAATA TGACAAAACAGGAGCTAAAAGAAAAGCTCATCTCAATTGCAAAAGAAAAATATGAGAAGAAAGAACAAGAAGTTGGCGAG CTTATGCGCGAGCTTGAAAGGGTTGTGCTTTTGCGAGTTGTTGACATGCACTGGATGGAACACATAGATGCAGTGGAACA GCTGAGAGAAGGCATATCTCTTCGCGCAATTGGCCAAAAAGACCCAATAGTTGAGTTCAGGTTCGAAGCGTTTGAGATGT TTGATGAAATGATAAAGAGAATCCAGGAGGATACAATAAAAATTATACTTCATGCAAATGTTGAAAATATGCCTCAAAGA GAAAGAGTTGTTAAAGAGATGTATGAAAATGCGCCATCAGACACACCTGTGAGAAAACCTGTTGTGAAAACACAGAAGGT TGGAAGAAACGACCCATGTCCTTGCGGGAGCGGCAAAAAATACAAAAAATGCTGCGGTGCAGTGTGA Protein sequence : MLKIIEKLIGSYSEREIKKILPIVDKIESLAPEYERLTDAELRQKTDIFKQRLKNGETLDDILPEAFAAVREAAWRTLKM RHFRVQLIGGIVLHQGRIAEMKTGEGKTLVATLPAYLNALEGKGVHIVTVNDYLAKRDAEWMGPIYNFLGLSVGVIVHGL THEERKKAYSCDITYGTNNEFGFDYLRDNMAIYKEELVQRELNYAIIDEVDSILIDEARTPLIISGPAEKSTDLYKRADN FVRRLKPLYYNSDDDKQMPDTTGYDYIVNEKRHTVSLTEEGIKKAEKYFGVTNLADPENATLHHHIIQALKAHALMKRDR DYVVKDGQVIIVDEFTGRLMYGRRFSEGLHQAIEAKEGVRIERESKTLATITFQNYFRLYKKLAGMTGTAKTEEQEFREI YKLDVIEIPTHKPMIRIDHPDKVYKTEKAKFEAIVQEIVETHKKGQPVLVGTVSIEKSEMLSEMLKKHGIKHEVLNAKHH EKEAMIIAKAGQKGAVTIATNMAGRGTDIVLGEGVAELGGLKVIGTERHESRRIDNQLRGRAGRQGDPGESRFYVSLEDD LMRLFGSERIKNLVESLGLPDDQPIEHKLLSDAIEKAQKRVEARNFEIRKHLLQFDDVLNKQREIIYSQRRKVLEGENLR DSILGMIDELVDYKIKVYTGESPHPEDWDIKGLLQDLKFIFLDSELYEQDAKNMTKQELKEKLISIAKEKYEKKEQEVGE LMRELERVVLLRVVDMHWMEHIDAVEQLREGISLRAIGQKDPIVEFRFEAFEMFDEMIKRIQEDTIKIILHANVENMPQR ERVVKEMYENAPSDTPVRKPVVKTQKVGRNDPCPCGSGKKYKKCCGAV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| secA2 | YP_006310687.1 | preprotein translocase subunit SecA2 | Not tested | FWisland_3 | Protein | 1e-125 | 43 |
