|
Name : Calkr_0401 (Calkr_0401) Accession : YP_004025565.1 Strain : Caldicellulosiruptor kristjanssonii 177R1B Genome accession: NC_014721 Putative virulence/resistance : Unknown Product : heat shock protein hslvu, atpase subunit hslu Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG1220 EC number : - Position : 447728 - 449125 bp Length : 1398 bp Strand : + Note : TIGRFAM: heat shock protein HslVU, ATPase subunit HslU; PFAM: ATPase AAA-2 domain protein; Clp ATPase-like; KEGG: ate:Athe_2178 ATP-dependent protease ATP-binding subunit HslU; SMART: AAA ATPase DNA sequence : ATGATGGAGTTAACTCCTCAGGAGATTGTAAGAGAGCTTGACAAGTATATAGTTGGGCAAGATAGGGCAAAAAAGTGTGT TGCCATTGCTCTTCGAAATAGGTATAGGCGTGCAAAGCTCCCAAAGGAGCTTCAGGATGAGATAACGCCAAAGAACATCT TGATGGTAGGGCCAACAGGTGTTGGTAAAACAGAGATTGCAAGAAGACTTGCAAAGCTTGTGAATGCCCCGTTTGTAAAA GTTGAAGCAACAAAGTTTACTGAGGTTGGATATGTTGGAAGAGATGTAGATTCAATGGTTCGAGACCTTGTTGAAAATGC AATTTCTTTAGTTAAGAGCGAGTACATGGAAAGAATGAAAGAAAGAGCAAAAGCTCTTGTTGAGGACAGAATTTTGGAAA TATTAATTCCTGAACCTCAGTCAAGAAAAGCAGGGTTTAAAAATCCGTTTGAAGCACTTTTTGGTGCCACCTCACAAGAA CCAGAGCAGAGTTATCAGACAACAGATGACTATATCAGAACGCAAAGAGAGATTTTGCGCGAGAAACTTCGCTCTGGTGA GCTTGAAGACAAGGTGATTGAGGTTGAGGTTGAAGATACTGTAAAGCCACCGTTTGAGATGATTATGGGAACAATTTCTG ACGAGATGGGGATTTCCTTCCAGGACGTTTTTGGGTCGCTATTTCCAAAGAAAAAGAAAAAGAAAAAGATGACAATAAGG GAAGCACGCGAGGTTTTAGAGCAGGAGGAGTACAACAAGCTCATTGACATGGATGAGGTTATAAAGGAAGCAATTCAGAG AGCTGAGCAACATGGAATCATCTTTATTGACGAGATAGACAAGATTGCAGGAAAAGGTTCAAGTGTTGGTCCTGATGTGT CAAGAGAAGGTGTGCAAAGAGACATTCTTCCCATTGTTGAGGGAAGTACTGTTATGACAAAATACGGTCCTGTAAAGACA GACCACATTCTGTTTATTGCAGCTGGAGCTTTCCATGTTGCAAAGGTTTCTGACCTAATACCAGAACTTCAGGGAAGGTT CCCGGTTGTTGTGGAGCTAAATCCTTTGACAGAAGAGGATTTCAAAAAGATACTTACACAGCCGAAGAATGCAATTATAA AGCAGTATATTGAGCTTATGAAGACAGAGGGTGTGAACATTACCTTTACAGACGATGCAATAGAGGCAATTGCAAAGGTT GCTGTGAAGATAAATGAACAGAGCGAGAATATCGGTGCGCGTAGACTTCACACTGTTGTTGAAAAGATAATGGAGGATAT TTCGTTTGAATATGCAAATGTTGAAAAACCAATTGACCTTGTGATTGACAAGGATTATGTATATTCAAAGGTTTCGGATA TTATAAAGGACAAAGATTTGAGCAGGTTCATAATATAA Protein sequence : MMELTPQEIVRELDKYIVGQDRAKKCVAIALRNRYRRAKLPKELQDEITPKNILMVGPTGVGKTEIARRLAKLVNAPFVK VEATKFTEVGYVGRDVDSMVRDLVENAISLVKSEYMERMKERAKALVEDRILEILIPEPQSRKAGFKNPFEALFGATSQE PEQSYQTTDDYIRTQREILREKLRSGELEDKVIEVEVEDTVKPPFEMIMGTISDEMGISFQDVFGSLFPKKKKKKKMTIR EAREVLEQEEYNKLIDMDEVIKEAIQRAEQHGIIFIDEIDKIAGKGSSVGPDVSREGVQRDILPIVEGSTVMTKYGPVKT DHILFIAAGAFHVAKVSDLIPELQGRFPVVVELNPLTEEDFKKILTQPKNAIIKQYIELMKTEGVNITFTDDAIEAIAKV AVKINEQSENIGARRLHTVVEKIMEDISFEYANVEKPIDLVIDKDYVYSKVSDIIKDKDLSRFII |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hslU | YP_003728753.1 | heat shock protein HslU | Not tested | cag PAI | Protein | 3e-93 | 50 |
