Gene Information

Name : Calkr_0326 (Calkr_0326)
Accession : YP_004025499.1
Strain : Caldicellulosiruptor kristjanssonii 177R1B
Genome accession: NC_014721
Putative virulence/resistance : Unknown
Product : thiamine biosynthesis protein thic
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0422
EC number : -
Position : 366110 - 367372 bp
Length : 1263 bp
Strand : +
Note : KEGG: ate:Athe_0373 thiamine biosynthesis protein ThiC; TIGRFAM: thiamine biosynthesis protein ThiC; PFAM: thiamine biosynthesis protein ThiC

DNA sequence :
ATGACTCAAATGAGCTTAGCAAAACAAGGAATATTTACAAGAGAGATGGAGCTTGCTATTAAGAACGAGGAGATAGATAA
AGAAGAGTTTTTGCAAAAGGTTGCAGAGGGCAAAATTGTAATTCCTGCAAATAAGAATAGAAAAAGAGACAGATATTTTG
CTATTGGCGATGGAACATATGTCAAGATAAATGTTAACCTTGGTGTGTCAGAGGCATGTCCAAACTTTGAATATGAAATC
CAGAAGCTTGAACTTGCCAAAAAATTTGATGTTGAGTCTGTGATGGATTTATCCAGCGGGCTTGATGCTTCAAACTTCAG
AAAATTCATTCTTCAAAACTATGACTTTATAGTAGGAACAGTTCCAGTTTACCAGGTTGCATCAAGGCACGACGACATTA
CAAAGGTTGATGGCAAAGAGTTTATAGAAGAGATTGAAAGGCAGGCAGAAGAAGGAGTTGACTTTTTCACAATCCATGCA
GGAATTACAAGAAAGGCTTTGGAGAGATTTGAAAAAAATGAGCGTCTGCTCAAGATTGTCTCAAGAGGCGGAGCACTTCT
TTATAAATGGATGATGGCAAACGGCAAAGAAAATCCTTTGTATGAGCATTTTGATGAGATTTTGAAGATATGCAAAAAAC
ATGATGTTACAATCAGCCTTGGCGACAGTCTCCGACCAGGTGCGGTGGTTGATGCAACAGACGCGCTGCAGATAGAAGAA
CTTATAAACCTTGGCGAGCTTACAAAAATGGCCTGGAAAGAGGATGTGCAGGTGATGATAGAAGGGCCAGGACATATGAG
AGCAAATGAGATTGCAGCAAACATGGTAATTCAAAAGAGGCTTTGCCACGGTGCACCGTTTTATGTTTTGGGACCTCTTA
CAACAGACATTGCAGCAGGGTACGACCATATATCAGGTGCGATGGGTGCGCTCATTGCAGCTTTGAATGGAGCAGATTTT
CTGTGCTATGTTACACCTGCTGAGCATTTGAGACTTCCTTCTTTAGAAGATGTCAAAGAAGGGATTGTTGCGTTCAAAAT
TGCAGCGCACAGTGCAAATATAGCAAAAGGGTTCAAAAAGCCGCTTGAAAAGGATATTGAGATGTCAGTTGCAAGAAGAG
ACCTTGACTGGGAAAAGATGATAAGCCTTTCGGTTGACCCTGAGAAGGCAAGAGAGTACAGAATCAGTTTCACATCTGAC
ACATGTTCAATGTGTGGAAGACTCTGCGCTGTAAAAAATTCAAGGGATGAGGCTATTTTGTAA

Protein sequence :
MTQMSLAKQGIFTREMELAIKNEEIDKEEFLQKVAEGKIVIPANKNRKRDRYFAIGDGTYVKINVNLGVSEACPNFEYEI
QKLELAKKFDVESVMDLSSGLDASNFRKFILQNYDFIVGTVPVYQVASRHDDITKVDGKEFIEEIERQAEEGVDFFTIHA
GITRKALERFEKNERLLKIVSRGGALLYKWMMANGKENPLYEHFDEILKICKKHDVTISLGDSLRPGAVVDATDALQIEE
LINLGELTKMAWKEDVQVMIEGPGHMRANEIAANMVIQKRLCHGAPFYVLGPLTTDIAAGYDHISGAMGALIAALNGADF
LCYVTPAEHLRLPSLEDVKEGIVAFKIAAHSANIAKGFKKPLEKDIEMSVARRDLDWEKMISLSVDPEKAREYRISFTSD
TCSMCGRLCAVKNSRDEAIL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00317 YP_008207782.1 Thiamine biosynthesis protein ThiC Not tested AbaR25 Protein 6e-70 44
BJAB0868_00321 YP_008211647.1 Thiamine biosynthesis protein ThiC Not tested AbaR26 Protein 6e-70 44