Gene Information

Name : Calkr_2451 (Calkr_2451)
Accession : YP_004027499.1
Strain : Caldicellulosiruptor kristjanssonii 177R1B
Genome accession: NC_014721
Putative virulence/resistance : Virulence
Product : capsular exopolysaccharide family
Function : -
COG functional category : D : Cell cycle control, cell division, chromosome partitioning
COG ID : COG0489
EC number : 2.7.10.2
Position : 2547250 - 2548026 bp
Length : 777 bp
Strand : -
Note : KEGG: clj:CLJU_c05160 exopolysaccharide biosynthesis protein; TIGRFAM: capsular exopolysaccharide family

DNA sequence :
ATGAGTATAGTTAAAGAGGTAATAGCATATTACAATCCGCGCTCACCAATAACAGAAAGTTACAGAATGTTACGAACAAA
TATTCAGTACTCTAGCCTTGACAAGCCTATTAAAAGCTTAGTAATAACAAGTTCAGGGCCGTCAGAGGGAAAAACAATAA
CGACGGCTAATTTAGCAGTTGTAATGGCTCAGGCTGGTAGCAAAGTGTTGGTTATTGATGCAGATTTGAGAAGACCTGCT
ATACATAAGGTTTTTGGTGTTAATAACAGGTTTGGTTTAACTAATATATTAGCCGAAAATAAATTGTTTGAAGAAGTAGT
TCAAAAAGATGGTATAGAAAACTTAGATTTACTTACCTCAGGTCCAATTCCTCCAAATCCTGCCGAATTATTAGGTTCAA
AAAAGTTCGAAAATTTCCTTTCTTATGTTAGGGAAAGATATGATTATGTTATAATTGATACACCTCCGTGTGGTAGTATA
ACTGATGCTGCAATAGTAGGAAGAATTGTTGATGGGGTTATATTAGTTGCTTCTGCTGGAGAAGTTGAAATTGAAGCAAT
ACAGCATGCAAAGGAAAATTTACAGAAAGTAAATGCAAATATAATCGGCGTGGTTTTAAACAAAGTGAATAAACAAACAT
CAGGTTACTATTATTACTATTACTATTATTATTACTATTACCAAGATGATAGCGGTGAAATAATAAAAAAGAAGAAAGGT
GAAAGAAGAAAGAAAAGAAAAGAAAGGTATACAGCACCGGTAGAGTCGAAAAATTAA

Protein sequence :
MSIVKEVIAYYNPRSPITESYRMLRTNIQYSSLDKPIKSLVITSSGPSEGKTITTANLAVVMAQAGSKVLVIDADLRRPA
IHKVFGVNNRFGLTNILAENKLFEEVVQKDGIENLDLLTSGPIPPNPAELLGSKKFENFLSYVRERYDYVIIDTPPCGSI
TDAAIVGRIVDGVILVASAGEVEIEAIQHAKENLQKVNANIIGVVLNKVNKQTSGYYYYYYYYYYYYQDDSGEIIKKKKG
ERRKKRKERYTAPVESKN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cap1B AAA64641.1 type 1 capsule synthesis gene Virulence SCCcap1 Protein 2e-37 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Calkr_2451 YP_004027499.1 capsular exopolysaccharide family VFG1368 Protein 1e-25 42