Gene Information

Name : Calkr_2318 (Calkr_2318)
Accession : YP_004027382.1
Strain : Caldicellulosiruptor kristjanssonii 177R1B
Genome accession: NC_014721
Putative virulence/resistance : Resistance
Product : ABC transporter-like protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 2381809 - 2382486 bp
Length : 678 bp
Strand : -
Note : KEGG: ate:Athe_2297 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase

DNA sequence : 
ATGATCGAACTTTATGATATCTACAAAATCTACAAGATGGGCGAAAATGAGGTGTCTGCTTTAAACGGTGTCAGCTTGAA
AATCAATGCTCACGAGTTTGTTGCAATAGTTGGGCCATCCGGTTCAGGAAAATCAACCCTGATGAACATCATAGGCTGCC
TTGACACGCCAACATCCGGCACATACATACTGGATGGTCATGAAGTCAGCAGACTCAACGACAACCAGCTTGCAGAGATT
CGAAACAGCAAGATAGGCTTTGTGTTTCAAAACTTTAACTTAATACCGCAGCTCACAGCTCTTGAAAATGTTGAGCTTCC
TTTAATCTACAAAGGTGTTCCAGCCTCTGCACGTCACAGGCTTGCAAAAGAAGCTTTGGCAAGGGTCGGCTTGGAACATA
GAATGCATCACAGACCAAGAGAGCTATCTGGCGGTCAGCAGCAGAGGGTTGCAATTGCAAGGGCGCTTGTGACAAGTCCG
CCGATAATTCTGGCTGATGAGCCAACGGGAAATTTGGACTCAAAATCAGGTGCTGAGATTATGCAGATTTTCAAAGAGCT
TCACGCTCAAGGAAACACCATTGTTTTAATCACGCACGACAACAACATTGCCATGCAGGCAAAAAGGATTGTGAGGATTC
AAGACGGCCAAATAATAGAGGACAAGGAGGTGAGCTGA

Protein sequence : 
MIELYDIYKIYKMGENEVSALNGVSLKINAHEFVAIVGPSGSGKSTLMNIIGCLDTPTSGTYILDGHEVSRLNDNQLAEI
RNSKIGFVFQNFNLIPQLTALENVELPLIYKGVPASARHRLAKEALARVGLEHRMHHRPRELSGGQQQRVAIARALVTSP
PIILADEPTGNLDSKSGAEIMQIFKELHAQGNTIVLITHDNNIAMQAKRIVRIQDGQIIEDKEVS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Spaf_1862 YP_006310627.1 amino acid ABC transporter ATP-binding protein Not tested FWisland_2 Protein 4e-38 43
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-34 43
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 1e-34 43
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-34 43
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-33 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Calkr_2318 YP_004027382.1 ABC transporter-like protein NC_012469.1.7686878. Protein 2e-62 58
Calkr_2318 YP_004027382.1 ABC transporter-like protein CP001581.1.gene598.p Protein 3e-43 50
Calkr_2318 YP_004027382.1 ABC transporter-like protein NC_008702.1.4606598. Protein 3e-49 49
Calkr_2318 YP_004027382.1 ABC transporter-like protein CP001581.1.gene798.p Protein 3e-41 47
Calkr_2318 YP_004027382.1 ABC transporter-like protein NC_012469.1.7686946. Protein 5e-30 41