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Name : Calkr_2286 (Calkr_2286) Accession : YP_004027353.1 Strain : Caldicellulosiruptor kristjanssonii 177R1B Genome accession: NC_014721 Putative virulence/resistance : Virulence Product : polysaccharide biosynthesis protein capd Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG1086 EC number : - Position : 2346777 - 2348684 bp Length : 1908 bp Strand : - Note : PFAM: polysaccharide biosynthesis protein CapD; KEGG: tte:TTE0668 nucleoside-diphosphate sugar epimerase DNA sequence : ATGCTCGTAAATAAATTTATAAGAAGGTGTTATTTAATATTTTTTAGAAAAAGAGCAGACCTTCTTACTGTGATTGATGT AATATTGATAGGGGTTTCGTATTTTGCTTCCTATTTGATAAGATTTGATTTTCAATTAGCTCCCATCTATTATGAAAGTA TTATCTTAACTACAATAATATTTGAAATTACGATTGTTAGTTGCCTGTACTTTTCTGGAAACTATAAGATTATATGGAGG TATGCAACAACAAATGAGTTGATAAGATTATTACTAGTGGTATTGATAGGAAGTAGTCTTGCATCATTTATAATCTACAT TGTAAACTTAAGAATTCCAAGGAGTATATATCTTTTGTCATATGTCCTTATAACAATAAGTTTATTGGTAAGCAGAATAA TTTATATGTACATAAATGAGAAGAGGAAGAAATTTCAAAGTTATAAAATAGAAAGGCAAAAAAGAGCGCTCATTATTGGG GCAGGATCTGCTGGGCAGTTAATTTTAAATGAACTTAAAAAACATTCTGAAGTTGGGATTTTACCAGTCGCATTTTTAGA TGATGATGAAAACAAGCACTATAGATACATAAATGGAGTTATAGTTTTAGGAAAGATAGAAGAGCTTCCTTATGTGGTTG AAGAAAAGAGCATTGATTTGGTTATATATGCAATACCATCGGCTCATCCAAGTTTGCTAAGAAAGGTTTTAAATCTTTGC AATAAAGCTAAGGTAGAATTAAGAACTATTCCAGGAGTGTATGAACTAATTAGAAATCCATCTGCTTTGAATGTAAGAAA TATTAGAAAGGTAAACTTGGAAGATTTACTCCGAAGAGAACCAATAAAGATTGACTTAAAAGATATAAGTGAGTTTTTAG TTAATAAGCGAGTGCTTGTAACAGGAGCAGGAGGCTCAATTGGCTCAGAAATTGTTCGACAAGTTTTAAGATTTGAACCG GCTGAGGTAATATGCTTAGATATATATGAGAACACTTTATATGACTTGCAGCAAGAGCTTATTAACACACCTTATATATC CAAATGCAAATTTTTAATAGGAAGCATCAGAGATATAAATAGATTGGAAAACATTTTTAAGCAATACAAGCCAGAAATTG TTTTTCATGCAGCAGCACATAAGCATGTACCATTGATGGAAGATAGCCCTCAAGAAGCAGTGAAGAATAATATCTTTGGT ACATTAAACTTGGTAGAGATCTCAGATAAGTATAATATAAAAAAGTTTATTATGATTTCAACCGATAAAGCTGTAAATCC TAAAAGTGTTATGGGAATGACAAAAAGAATTTGCGAACTGCTGGTACAGGCATACAATAGCAAAAGTGATACTGAATTTT CAATTGTAAGATTTGGAAATGTACTGGGGAGCAATGGAAGTGTAGTACCTCTTTTTATGAAGCAAATAGAAAAAGGTGGA CCTGTTACAGTTACACATGAAGAAGTTAGAAGGTATTTTATGACTATAAACGAAGCTGTTCAACTTGTTTTACAAGCAGC AGCCTTTGCAAAAGGCGGCGAGGTTTTTGTTTTGGATATGGGAGAGCCTGTAAAGATCATTGACTTAGCAAGAGATTTGA TAAGGATTTATGGCTATGAACCTGATGTTGATATAAAAATTGAAATCATCGGCCTTCGCCCAGGTGAAAAACTCTACGAG GAACTTTTGATTGATAAAGAGAATTGTATTGCTACGAAGAATGATAAGATATGGGTGGAGAAAACTTATAACTCTGCAAA TGTTGAATATATATTAGAAGCATTGGATTTCTTAAGATCAAATATAGATGAAAAGGATAATGAAGGAATTAAAGAAGAGT TGAAATTGGTATTAAAAAATATAGAGAAGGCTGAAACAACTAGCGTTTCACCTGTAATTGACAGGTGA Protein sequence : MLVNKFIRRCYLIFFRKRADLLTVIDVILIGVSYFASYLIRFDFQLAPIYYESIILTTIIFEITIVSCLYFSGNYKIIWR YATTNELIRLLLVVLIGSSLASFIIYIVNLRIPRSIYLLSYVLITISLLVSRIIYMYINEKRKKFQSYKIERQKRALIIG AGSAGQLILNELKKHSEVGILPVAFLDDDENKHYRYINGVIVLGKIEELPYVVEEKSIDLVIYAIPSAHPSLLRKVLNLC NKAKVELRTIPGVYELIRNPSALNVRNIRKVNLEDLLRREPIKIDLKDISEFLVNKRVLVTGAGGSIGSEIVRQVLRFEP AEVICLDIYENTLYDLQQELINTPYISKCKFLIGSIRDINRLENIFKQYKPEIVFHAAAHKHVPLMEDSPQEAVKNNIFG TLNLVEISDKYNIKKFIMISTDKAVNPKSVMGMTKRICELLVQAYNSKSDTEFSIVRFGNVLGSNGSVVPLFMKQIEKGG PVTVTHEEVRRYFMTINEAVQLVLQAAAFAKGGEVFVLDMGEPVKIIDLARDLIRIYGYEPDVDIKIEIIGLRPGEKLYE ELLIDKENCIATKNDKIWVEKTYNSANVEYILEALDFLRSNIDEKDNEGIKEELKLVLKNIEKAETTSVSPVIDR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SSP0063 | YP_300153.1 | capsular polysaccharide biosynthesis protein | Not tested | SCC15305cap | Protein | 2e-83 | 46 |
| cap1D | AAA64643.1 | type 1 capsule synthesis gene | Virulence | SCCcap1 | Protein | 2e-82 | 45 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Calkr_2286 | YP_004027353.1 | polysaccharide biosynthesis protein capd | VFG1300 | Protein | 1e-81 | 46 |
